RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 GKN1Q9NS71 199 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 PIGVQ9NUD9 493 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 ZDHHC7Q9NXF8 308 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 LMCD1Q9NZU5 365 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 XPO7Q9UIA9 1087 aaKnown RBP17.26■□□□□ 0.35
SHOX-201ENST00000334060 STRIP2Q9ULQ0 834 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 CCL26Q9Y258 94 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 USTQ9Y2C2 406 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 DAB1O75553 588 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 PALMO75781 387 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 HMBSP08397 361 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 TAS2R40P59535 323 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 EFEMP1Q12805 493 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 KIF5AQ12840 1032 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 COL19A1Q14993 1142 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 ATP13A4Q4VNC1 1196 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 PABPC1LQ4VXU2 614 aaKnown RBP17.26■□□□□ 0.35
SHOX-201ENST00000334060 SLC46A2Q9BY10 475 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 FBXO44Q9H4M3 255 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 POPDC2Q9HBU9 364 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 ASAH2Q9NR71 780 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 KLHL11Q9NVR0 708 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 INTUQ9ULD6 942 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 SNX10Q9Y5X0 201 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 TLR5O60602 858 aa17.25■□□□□ 0.35
SHOX-201ENST00000334060 HSF2BPO75031 334 aa17.25■□□□□ 0.35
SHOX-201ENST00000334060 FBXO21O94952 628 aa17.25■□□□□ 0.35
SHOX-201ENST00000334060 MYBL1P10243 752 aa17.25■□□□□ 0.35
SHOX-201ENST00000334060 TNNT1P13805 278 aa17.25■□□□□ 0.35
SHOX-201ENST00000334060 KCNA5P22460 613 aa17.25■□□□□ 0.35
SHOX-201ENST00000334060 IL1R2P27930 398 aa17.25■□□□□ 0.35
SHOX-201ENST00000334060 NAP1L1P55209 391 aaKnown RBP17.25■□□□□ 0.35
SHOX-201ENST00000334060 NME3Q13232 169 aa17.25■□□□□ 0.35
SHOX-201ENST00000334060 CYP4V2Q6ZWL3 525 aaPredicted RBP17.25■□□□□ 0.35
SHOX-201ENST00000334060 MON1AQ86VX9 555 aa17.25■□□□□ 0.35
SHOX-201ENST00000334060 LRRC57Q8N9N7 239 aa17.25■□□□□ 0.35
SHOX-201ENST00000334060 SLITRK1Q96PX8 696 aa17.25■□□□□ 0.35
SHOX-201ENST00000334060 ADAM7Q9H2U9 754 aa17.25■□□□□ 0.35
SHOX-201ENST00000334060 PIDD1Q9HB75 910 aa17.25■□□□□ 0.35
SHOX-201ENST00000334060 MAFFQ9ULX9 164 aa17.25■□□□□ 0.35
SHOX-201ENST00000334060 MUC3AQ02505 3323 aa17.25■□□□□ 0.35
SHOX-201ENST00000334060 TRIOO75962 3097 aa17.25■□□□□ 0.35
SHOX-201ENST00000334060 DENND4CQ5VZ89 1909 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 NRDCO43847 1150 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 OAS1P00973 400 aaKnown RBP17.24■□□□□ 0.35
SHOX-201ENST00000334060 PTPN2P17706 415 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 PSMA2P25787 234 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 HOXA9P31269 272 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 SULT1E1P49888 294 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 DNA2P51530 1060 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 EPHA5P54756 1037 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 HDAC4P56524 1084 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 TFF2Q03403 129 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 SKIV2LQ15477 1246 aaKnown RBP17.24■□□□□ 0.35
SHOX-201ENST00000334060 C10orf76Q5T2E6 689 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 BTBD8Q5XKL5 378 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 SCML4Q8N228 414 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 ZFRQ96KR1 1074 aaKnown RBP17.24■□□□□ 0.35
SHOX-201ENST00000334060 WDR24Q96S15 920 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 NPY6RQ99463 290 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 DDX23Q9BUQ8 820 aaKnown RBP17.24■□□□□ 0.35
SHOX-201ENST00000334060 GPATCH2LQ9NWQ4 482 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.24■□□□□ 0.35
SHOX-201ENST00000334060 WDR35Q9P2L0 1181 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 PRAMEF12O95522 483 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 HNRNPA1P09651 372 aaKnown RBP eCLIP17.24■□□□□ 0.35
SHOX-201ENST00000334060 GPD1P21695 349 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 GJC1P36383 396 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 MATKP42679 507 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 KCNQ1P51787 676 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 ARHGAP29Q52LW3 1261 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 EFHC1Q5JVL4 640 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 C10orf120Q5SQS8 335 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 PDZD4Q76G19 769 aaPredicted RBP17.24■□□□□ 0.35
SHOX-201ENST00000334060 GPR149Q86SP6 731 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 ITIH5Q86UX2 942 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 FAM131BQ86XD5 332 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 MSANTD4Q8NCY6 345 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 ADAMTS19Q8TE59 1207 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 FAM172AQ8WUF8 416 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 IRGQQ8WZA9 623 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 PABPC5Q96DU9 382 aaKnown RBP17.24■□□□□ 0.35
SHOX-201ENST00000334060 POMKQ9H5K3 350 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 TLR8Q9NR97 1041 aaKnown RBP17.24■□□□□ 0.35
SHOX-201ENST00000334060 PCSK1NQ9UHG2 260 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 RASAL2Q9UJF2 1139 aa17.24■□□□□ 0.35
SHOX-201ENST00000334060 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.23■□□□□ 0.35
SHOX-201ENST00000334060 GRXCR2A6NFK2 248 aa17.23■□□□□ 0.35
SHOX-201ENST00000334060 M0QYT0 321 aa17.23■□□□□ 0.35
SHOX-201ENST00000334060 CAPN9O14815 690 aa17.23■□□□□ 0.35
SHOX-201ENST00000334060 LRCH4O75427 683 aa17.23■□□□□ 0.35
SHOX-201ENST00000334060 LLGL1Q15334 1064 aa17.23■□□□□ 0.35
SHOX-201ENST00000334060 SMTNL2Q2TAL5 461 aa17.23■□□□□ 0.35
SHOX-201ENST00000334060 KCNT1Q5JUK3 1230 aa17.23■□□□□ 0.35
SHOX-201ENST00000334060 GET4Q7L5D6 327 aaPredicted RBP17.23■□□□□ 0.35
SHOX-201ENST00000334060 BNIPLQ7Z465 357 aa17.23■□□□□ 0.35
SHOX-201ENST00000334060 ANKS1BQ7Z6G8 1248 aa17.23■□□□□ 0.35
SHOX-201ENST00000334060 ZDHHC17Q8IUH5 632 aa17.23■□□□□ 0.35
SHOX-201ENST00000334060 CCDC185Q8N715 623 aa17.23■□□□□ 0.35
SHOX-201ENST00000334060 HDAC7Q8WUI4 952 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms