RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 KANSL3Q9P2N6 904 aa17.07■□□□□ 0.32
NSMCE3-201ENST00000332303 NQO1P15559 274 aaKnown RBP17.07■□□□□ 0.32
NSMCE3-201ENST00000332303 CNTN1Q12860 1018 aa17.07■□□□□ 0.32
NSMCE3-201ENST00000332303 ERMARDQ5T6L9 678 aa17.07■□□□□ 0.32
NSMCE3-201ENST00000332303 PLEKHM3Q6ZWE6 761 aa17.07■□□□□ 0.32
NSMCE3-201ENST00000332303 DUSP9Q99956 384 aaKnown RBP17.07■□□□□ 0.32
NSMCE3-201ENST00000332303 RMND5AQ9H871 391 aa17.07■□□□□ 0.32
NSMCE3-201ENST00000332303 AVENQ9NQS1 362 aaPredicted RBP17.07■□□□□ 0.32
NSMCE3-201ENST00000332303 TFRCP02786 760 aaKnown RBP17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 GSNP06396 782 aa17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 CALB2P22676 271 aa17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 SERPINB5P36952 375 aa17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 RAB27AP51159 221 aa17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 TRIM60Q495X7 471 aa17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 RETSATQ6NUM9 610 aa17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 SLC27A1Q6PCB7 646 aa17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 NT5DC4Q86YG4 428 aa17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 TRIM48Q8IWZ4 208 aa17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 SCUBE2Q9NQ36 999 aa17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 SLC25A13Q9UJS0 675 aa17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 VANGL2Q9ULK5 521 aa17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 XPO1O14980 1071 aaKnown RBP17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 ALDH2P05091 517 aa17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 PEX5P50542 639 aa17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 GRIK4Q16099 956 aa17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 ABHD16BQ9H3Z7 469 aa17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 SNTG2Q9NY99 539 aa17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 DIP2CQ9Y2E4 1556 aa17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 TMEM245Q9H330 911 aa17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 FBXO44Q9H4M3 255 aa17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 NAALADL1Q9UQQ1 740 aa17.06■□□□□ 0.32
NSMCE3-201ENST00000332303 KIF1CO43896 1103 aaKnown RBP17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 PLA2G6O60733 806 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 MLNP12872 115 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 DEFA1P59665 94 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 DEFA3P59666 94 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 CDH17Q12864 832 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 CARNMT1Q8N4J0 409 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 KAT2BQ92831 832 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 DCLK3Q9C098 648 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 WDR41Q9HAD4 459 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 LRRC4BQ9NT99 713 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 ZMYM2Q9UBW7 1377 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 TOMM70O94826 608 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 UBTFL6P0CB48 400 aaPredicted RBP17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 TPBGLP0DKB5 382 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 RENBPP51606 427 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 EIF2B5Q13144 721 aaKnown RBP17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 CAMK2GQ13555 558 aaPredicted RBP17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 CYLC2Q14093 348 aaPredicted RBP17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 FKBP1CQ5VVH2 108 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 SCUBE1Q8IWY4 988 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 DCLRE1BQ9H816 532 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 BLOC1S4Q9NUP1 217 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 CPA4Q9UI42 421 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 SLIT1O75093 1534 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 CLTCQ00610 1675 aaKnown RBP17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 CES2O00748 559 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 USP1O94782 785 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 PAEPP09466 180 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 GP5P40197 560 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 CSHL1Q14406 222 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 C11orf96Q7Z7L8 435 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 SH3GL1Q99961 368 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 TLR10Q9BXR5 811 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 VTA1Q9NP79 307 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 STARD7Q9NQZ5 370 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 CACNA2D2Q9NY47 1150 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 AGLP35573 1532 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 DNALI1O14645 258 aaPredicted RBP17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 SERPINB3P29508 390 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 EPHB3P54753 998 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 ILF2Q12905 390 aaKnown RBP17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 KPNB1Q14974 876 aaKnown RBP17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 ERAP2Q6P179 960 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 LZTR1Q8N653 840 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 OPTNQ96CV9 577 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 PDP2Q9P2J9 529 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 SPACA6W5XKT8 324 aa17.05■□□□□ 0.32
NSMCE3-201ENST00000332303 CASTOR2A6NHX0 329 aa17.04■□□□□ 0.32
NSMCE3-201ENST00000332303 CBX4O00257 560 aa17.04■□□□□ 0.32
NSMCE3-201ENST00000332303 DDX3XO00571 662 aaKnown RBP eCLIP17.04■□□□□ 0.327e-28■■■■■ 38.5
NSMCE3-201ENST00000332303 ENDOD1O94919 500 aa17.04■□□□□ 0.32
NSMCE3-201ENST00000332303 HNRNPH1P31943 449 aaKnown RBP17.04■□□□□ 0.32
NSMCE3-201ENST00000332303 MTA1Q13330 715 aa17.04■□□□□ 0.32
NSMCE3-201ENST00000332303 SLC30A10Q6XR72 485 aa17.04■□□□□ 0.32
NSMCE3-201ENST00000332303 CCDC60Q8IWA6 550 aaPredicted RBP17.04■□□□□ 0.32
NSMCE3-201ENST00000332303 HASPINQ8TF76 798 aa17.04■□□□□ 0.32
NSMCE3-201ENST00000332303 BTN2A2Q8WVV5 523 aa17.04■□□□□ 0.32
NSMCE3-201ENST00000332303 PRKD2Q9BZL6 878 aa17.04■□□□□ 0.32
NSMCE3-201ENST00000332303 GPC1P35052 558 aa17.04■□□□□ 0.32
NSMCE3-201ENST00000332303 PLIN5Q00G26 463 aa17.04■□□□□ 0.32
NSMCE3-201ENST00000332303 RASA2Q15283 850 aa17.04■□□□□ 0.32
NSMCE3-201ENST00000332303 LY6KQ17RY6 165 aa17.04■□□□□ 0.32
NSMCE3-201ENST00000332303 GALNTL6Q49A17 601 aa17.04■□□□□ 0.32
NSMCE3-201ENST00000332303 SLC22A9Q8IVM8 553 aa17.04■□□□□ 0.32
NSMCE3-201ENST00000332303 CDK5RAP1Q96SZ6 601 aaKnown RBP17.04■□□□□ 0.32
NSMCE3-201ENST00000332303 TLR8Q9NR97 1041 aaKnown RBP17.04■□□□□ 0.32
NSMCE3-201ENST00000332303 LNPEPQ9UIQ6 1025 aa17.04■□□□□ 0.32
NSMCE3-201ENST00000332303 NCF1BA6NI72 391 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms