RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 PPIL6Q8IXY8 311 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 PPP1R10Q96QC0 940 aaKnown RBP10.87□□□□□ -0.67
CLN8-201ENST00000331222 CAMKK2Q96RR4 588 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 NIF3L1Q9GZT8 377 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.87□□□□□ -0.675e-6■□□□□ 9.5
CLN8-201ENST00000331222 A0A087WZ62 844 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 KIF1CO43896 1103 aaKnown RBP10.86□□□□□ -0.67
CLN8-201ENST00000331222 KLHL2O95198 593 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 JCHAINP01591 159 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 RAB14P61106 215 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 STX4Q12846 297 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 MAP1SQ66K74 1059 aaPredicted RBP10.86□□□□□ -0.67
CLN8-201ENST00000331222 ACAD10Q6JQN1 1059 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 MRNIPQ6NTE8 343 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 USP49Q70CQ1 688 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 SPPL2AQ8TCT8 520 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 GRAMD1AQ96CP6 724 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 SH3GL2Q99962 352 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 KCTD14Q9BQ13 255 aaPredicted RBP10.86□□□□□ -0.67
CLN8-201ENST00000331222 FDXACB1Q9BRP7 624 aaPredicted RBP10.86□□□□□ -0.67
CLN8-201ENST00000331222 PHACTR1Q9C0D0 580 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 LYVE1Q9Y5Y7 322 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 ACSL4O60488 711 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 IFNA16P05015 189 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 CLTBP09497 229 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 FGFR3P22607 806 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 RCN1Q15293 331 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 AP5B1Q2VPB7 878 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 C16orf86Q6ZW13 317 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 KLHL25Q9H0H3 589 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 ABCG8Q9H221 673 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 BLOC1S6Q9UL45 172 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 ALG6Q9Y672 507 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 OR6A2O95222 327 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 ITIH2P19823 946 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 IL5RAQ01344 420 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 EPS8Q12929 822 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 GRIK3Q13003 919 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 OTUD3Q5T2D3 398 aaPredicted RBP10.86□□□□□ -0.67
CLN8-201ENST00000331222 FAM228AQ86W67 206 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 ILKAPQ9H0C8 392 aaPredicted RBP10.86□□□□□ -0.67
CLN8-201ENST00000331222 THG1LQ9NWX6 298 aaKnown RBP10.86□□□□□ -0.67
CLN8-201ENST00000331222 CDY2AQ9Y6F7 541 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 CDY1Q9Y6F8 540 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 TMEM150BA6NC51 233 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 TBC1D3BA6NDS4 549 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 IGF2BP3O00425 579 aaKnown RBP eCLIP10.86□□□□□ -0.67
CLN8-201ENST00000331222 SLC16A3O15427 465 aaKnown RBP10.86□□□□□ -0.67
CLN8-201ENST00000331222 GLP2RO95838 553 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 CXCL8P10145 99 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 CCT8P50990 548 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 FXR1P51114 621 aaKnown RBP eCLIP10.86□□□□□ -0.67
CLN8-201ENST00000331222 BEX3Q00994 111 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 MMRN1Q13201 1228 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 XRCC4Q13426 336 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 TCHHL1Q5QJ38 904 aaPredicted RBP10.86□□□□□ -0.67
CLN8-201ENST00000331222 CYP4Z1Q86W10 505 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 TRAPPC5Q8IUR0 188 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 CCT8L2Q96SF2 557 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 SH3GL1Q99961 368 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 KIFC1Q9BW19 673 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 MPP6Q9NZW5 540 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 CFAP73A6NFT4 308 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 H3BN98 237 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 DDNO94850 711 aaPredicted RBP10.86□□□□□ -0.67
CLN8-201ENST00000331222 KRT16P08779 473 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 PSMA3P25788 255 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 HNF4AP41235 474 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 KLC1Q07866 573 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 MAPK11Q15759 364 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 SYDE1Q6ZW31 735 aaPredicted RBP10.86□□□□□ -0.67
CLN8-201ENST00000331222 SRLQ86TD4 932 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 PRUNE1Q86TP1 453 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 ARRDC4Q8NCT1 418 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 TRAPPC12Q8WVT3 735 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 KRT35Q92764 455 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 RMND5AQ9H871 391 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 PCDHB2Q9Y5E7 798 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 SPATA31D3P0C874 917 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 ITGA3P26006 1051 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 TKTL1P51854 596 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 NBPF12Q5TAG4 269 aaPredicted RBP10.86□□□□□ -0.67
CLN8-201ENST00000331222 SLC30A10Q6XR72 485 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 SPATA31D4Q6ZUB0 917 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 TRPM8Q7Z2W7 1104 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 GLT6D1Q7Z4J2 308 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 JAMLQ86YT9 394 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 SLC4A5Q9BY07 1137 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 AVENQ9NQS1 362 aaPredicted RBP10.86□□□□□ -0.67
CLN8-201ENST00000331222 SHOC2Q9UQ13 582 aa10.86□□□□□ -0.67
CLN8-201ENST00000331222 PRDM15P57071 1507 aaPredicted RBP10.85□□□□□ -0.67
CLN8-201ENST00000331222 ARP10275 920 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 ADRA2BP18089 450 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 STILQ15468 1287 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 ATP6AP1LQ52LC2 224 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 PPM1LQ5SGD2 360 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 FBXO36Q8NEA4 188 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 RNFT2Q96EX2 444 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 PRMT6Q96LA8 375 aaPredicted RBP10.85□□□□□ -0.67
CLN8-201ENST00000331222 ACTR8Q9H981 624 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms