RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 COPAP53621 1224 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 IRX4P78413 519 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 UNC45BQ8IWX7 931 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 HIPK4Q8NE63 616 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 RAB3IL1Q8TBN0 382 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 FAM213AQ9BRX8 229 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 CDH22Q9UJ99 828 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 DTNAQ9Y4J8 743 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 TEX264Q9Y6I9 313 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 OTOFQ9HC10 1997 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 WDR90Q96KV7 1748 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 A0A0B4J269 797 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 CAPN8A6NHC0 703 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 TTLL13PA6NNM8 815 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 STRNO43815 780 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 SPAG6O75602 509 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 KRT37O76014 449 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 SNRPAP09012 282 aaKnown RBP18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 TUBB3Q13509 450 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 RABGAP1LQ5R372 815 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 OGFRL1Q5TC84 451 aaPredicted RBP18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 DNAJC24Q6P3W2 148 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 ERO1BQ86YB8 467 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 ACTRT2Q8TDY3 377 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 TAAR1Q96RJ0 339 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 FRMD8P1Q9BZ68 369 aaPredicted RBP18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 TIMMDC1Q9NPL8 285 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 MKS1Q9NXB0 559 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 INPP5FQ9Y2H2 1132 aa18.76■□□□□ 0.59
CLSTN3-202ENST00000331148 SPDYE16A6NNV3 312 aaPredicted RBP18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 H3BNX3 289 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 DENRO43583 198 aaKnown RBP18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 CST8O60676 142 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 LYPLA2O95372 231 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 C1QAP02745 245 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 PMLP29590 882 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 CUL2Q13617 745 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 CYLC2Q14093 348 aaPredicted RBP18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 DCUN1D2Q6PH85 259 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 MOB2Q70IA6 237 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 TRMT1LQ7Z2T5 733 aaKnown RBP18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 CTAGE3PQ8IX95 158 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 PPM1NQ8N819 430 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 FAM71DQ8N9W8 422 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 ZFRQ96KR1 1074 aaKnown RBP18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 TEX13BQ9BXU2 312 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 SLC13A1Q9BZW2 595 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 ITGA11Q9UKX5 1188 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 DMTF1Q9Y222 760 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 LZTS1Q9Y250 596 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 TTLL3Q9Y4R7 772 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 TCRBV5S1A1TA0A578 114 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 RFPL1O75677 317 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 ADARP55265 1226 aaKnown RBP18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 ENPEPQ07075 957 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 DBN1Q16643 649 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 TREML2Q5T2D2 321 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 DENND5BQ6ZUT9 1274 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 BBS12Q6ZW61 710 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 TTC13Q8NBP0 860 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 GAB3Q8WWW8 586 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 CFAP36Q96G28 342 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 OTUD5Q96G74 571 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 CLMNQ96JQ2 1002 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 MRPS26Q9BYN8 205 aaKnown RBP18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 GRIP2Q9C0E4 1043 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 UBAP1Q9NZ09 502 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 POMPQ9Y244 141 aa18.75■□□□□ 0.59
CLSTN3-202ENST00000331148 DHX15O43143 795 aaKnown RBP18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 PROCP04070 461 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 BPGMP07738 259 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 STX3Q13277 289 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 DMP1Q13316 513 aaPredicted RBP18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 BAATQ14032 418 aaPredicted RBP18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 UGCGQ16739 394 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 MYLK3Q32MK0 819 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 ZACNQ401N2 412 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 TDRD10Q5VZ19 366 aaKnown RBP18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 ISLR2Q6UXK2 745 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 ZCCHC23Q6ZST2 131 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 NIPA1Q7RTP0 329 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 CCDC33Q8N5R6 958 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 ZFP28Q8NHY6 868 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 IL31RAQ8NI17 732 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 DCUN1D1Q96GG9 259 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 RMDN3Q96TC7 470 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 CYP4F11Q9HBI6 524 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 APOBEC3GQ9HC16 384 aaKnown RBP18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 XAB2Q9HCS7 855 aaKnown RBP18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 PNPLA8Q9NP80 782 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 KCNH7Q9NS40 1196 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 PLK2Q9NYY3 685 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 ZNF180Q9UJW8 692 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 EFR3BQ9Y2G0 817 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 PTPRFP10586 1907 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 CXCL11O14625 94 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 KLHL2O95198 593 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 L1CAMP32004 1257 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 EMP3P54852 163 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 BMPR2Q13873 1038 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms