RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 MAMDC4Q6UXC1 1216 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 NIPA1Q7RTP0 329 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 RFX6Q8HWS3 928 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 SPNS2Q8IVW8 549 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 MPP5Q8N3R9 675 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 CCDC110Q8TBZ0 833 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 MTBPQ96DY7 904 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 APOPT1Q96IL0 206 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 PDCD2LQ9BRP1 358 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 SPATA16Q9BXB7 569 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 POLR3FQ9H1D9 316 aaPredicted RBP12.63□□□□□ -0.39
SEC24A-201ENST00000322887 VPS11Q9H270 941 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 NDE1Q9NXR1 346 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 RBAKQ9NYW8 714 aaPredicted RBP12.63□□□□□ -0.39
SEC24A-201ENST00000322887 CNTN3Q9P232 1028 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 IP6K2Q9UHH9 426 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 GJD2Q9UKL4 321 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 MTO1Q9Y2Z2 717 aaKnown RBP12.63□□□□□ -0.39
SEC24A-201ENST00000322887 COPEO14579 308 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 BUD23O43709 281 aaKnown RBP12.63□□□□□ -0.39
SEC24A-201ENST00000322887 LRCH4O75427 683 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 DHRS4L1P0CG22 281 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 MAP2K5Q13163 448 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 CDO1Q16878 200 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 DENND1BQ6P3S1 775 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 ARHGAP22Q7Z5H3 698 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 VSIG10LQ86VR7 867 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 RBM41Q96IZ5 413 aaKnown RBP12.63□□□□□ -0.39
SEC24A-201ENST00000322887 ZNF778Q96MU6 729 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 HEMK1Q9Y5R4 338 aaPredicted RBP12.63□□□□□ -0.39
SEC24A-201ENST00000322887 IKBKGQ9Y6K9 419 aa12.63□□□□□ -0.39
SEC24A-201ENST00000322887 PLXNB2O15031 1838 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 A0A1B0GTW7 788 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 ASB14A6NK59 587 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 TNPO2O14787 897 aaKnown RBP12.62□□□□□ -0.39
SEC24A-201ENST00000322887 FKTNO75072 461 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 IGHA2P01877 340 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 ITGAVP06756 1048 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 CSH1P0DML2 217 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 CSH2P0DML3 217 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 CDH8P55286 799 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 PRMT2P55345 433 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 EIF3EP60228 445 aaKnown RBP12.62□□□□□ -0.39
SEC24A-201ENST00000322887 MYL6P60660 151 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 ZNF200P98182 395 aaPredicted RBP12.62□□□□□ -0.39
SEC24A-201ENST00000322887 BTKQ06187 659 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 PGM5Q15124 567 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 CMPK2Q5EBM0 449 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 ARHGEF16Q5VV41 709 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 RASSF3Q86WH2 238 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 PHF13Q86YI8 300 aaPredicted RBP12.62□□□□□ -0.39
SEC24A-201ENST00000322887 HACE1Q8IYU2 909 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 TMC2Q8TDI7 906 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 VTI1AQ96AJ9 217 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 MTMR12Q9C0I1 747 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 AGO2Q9UKV8 859 aaKnown RBP12.62□□□□□ -0.39
SEC24A-201ENST00000322887 A0A088AWK7 358 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 SOWAHBA6NEL2 793 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 LRRIQ4A6NIV6 560 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 TOM1L1O75674 476 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 RBP3P10745 1247 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 KCNA4P22459 653 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 HOXD10P28358 340 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 RGS2P41220 211 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 PGGT1BP53609 377 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 SLC18A1P54219 525 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 LIN52Q52LA3 116 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 WDR78Q5VTH9 848 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 CCDC60Q8IWA6 550 aaPredicted RBP12.62□□□□□ -0.39
SEC24A-201ENST00000322887 PDIK1LQ8N165 341 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 PIWIL1Q96J94 861 aaKnown RBP12.62□□□□□ -0.39
SEC24A-201ENST00000322887 FAM81BQ96LP2 452 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 OXCT2Q9BYC2 517 aaPredicted RBP12.62□□□□□ -0.39
SEC24A-201ENST00000322887 IQCGQ9H095 443 aaKnown RBP12.62□□□□□ -0.39
SEC24A-201ENST00000322887 PREBQ9HCU5 417 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 SLC9A2Q9UBY0 812 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 ZNF212Q9UDV6 495 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 EXOC7Q9UPT5 735 aa12.62□□□□□ -0.39
SEC24A-201ENST00000322887 A0A0B4J269 797 aa12.61□□□□□ -0.39
SEC24A-201ENST00000322887 TM9SF1O15321 606 aa12.61□□□□□ -0.39
SEC24A-201ENST00000322887 HNRNPRO43390 633 aaKnown RBP12.61□□□□□ -0.39
SEC24A-201ENST00000322887 NR3C2P08235 984 aa12.61□□□□□ -0.39
SEC24A-201ENST00000322887 CTGFP29279 349 aa12.61□□□□□ -0.39
SEC24A-201ENST00000322887 PHBP35232 272 aa12.61□□□□□ -0.39
SEC24A-201ENST00000322887 RPL10AP62906 217 aaKnown RBP12.61□□□□□ -0.39
SEC24A-201ENST00000322887 DEUP1Q05D60 604 aa12.61□□□□□ -0.39
SEC24A-201ENST00000322887 DPYSL3Q14195 570 aa12.61□□□□□ -0.39
SEC24A-201ENST00000322887 PTPN20Q4JDL3 420 aa12.61□□□□□ -0.39
SEC24A-201ENST00000322887 FAM219BQ5XKK7 198 aa12.61□□□□□ -0.39
SEC24A-201ENST00000322887 OLFML2BQ68BL8 750 aa12.61□□□□□ -0.39
SEC24A-201ENST00000322887 MYLK4Q86YV6 388 aaPredicted RBP12.61□□□□□ -0.39
SEC24A-201ENST00000322887 HPS6Q86YV9 775 aa12.61□□□□□ -0.39
SEC24A-201ENST00000322887 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.61□□□□□ -0.39
SEC24A-201ENST00000322887 SPATA18Q8TC71 538 aa12.61□□□□□ -0.39
SEC24A-201ENST00000322887 NKD2Q969F2 451 aaPredicted RBP12.61□□□□□ -0.39
SEC24A-201ENST00000322887 GCNAQ96QF7 691 aa12.61□□□□□ -0.39
SEC24A-201ENST00000322887 MAN1C1Q9NR34 630 aa12.61□□□□□ -0.39
SEC24A-201ENST00000322887 DDX18Q9NVP1 670 aaKnown RBP12.61□□□□□ -0.39
SEC24A-201ENST00000322887 POLIQ9UNA4 740 aa12.61□□□□□ -0.39
SEC24A-201ENST00000322887 UBIAD1Q9Y5Z9 338 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms