RNA–Protein interactions for RNA: ENST00000318524.6

NFX1-201, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best) BASIC

Gene NFX1, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-201ENST00000318524 DCLRE1AQ6PJP8 1040 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 TMCO3Q6UWJ1 677 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 ZNF366Q8N895 744 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 NAT16Q8N8M0 369 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 MYCBPAPQ8TBZ2 947 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 PDCD6IPQ8WUM4 868 aaKnown RBP6.68□□□□□ -1.34
NFX1-201ENST00000318524 CASP10Q92851 521 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 ATXN7L3BQ96GX2 97 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 ZFYVE19Q96K21 471 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 TSEN34Q9BSV6 310 aaKnown RBP6.68□□□□□ -1.34
NFX1-201ENST00000318524 DUSP16Q9BY84 665 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 FAM107BQ9H098 131 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 NEUROG2Q9H2A3 272 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 LRRC4CQ9HCJ2 640 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 CHST12Q9NRB3 414 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 CABIN1Q9Y6J0 2220 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 GOLGA8KD6RF30 607 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 GOLGA8TH3BQL2 631 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 I6L893 689 aaPredicted RBP6.68□□□□□ -1.34
NFX1-201ENST00000318524 GRM6O15303 877 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 TEX28O15482 410 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 GJB3O75712 270 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 FGF18O76093 207 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 TIMP1P01033 207 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 URODP06132 367 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 GZMAP12544 262 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 FECHP22830 423 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 PGGT1BP53609 377 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 HDAC4P56524 1084 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 MAXP61244 160 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 SLC6A3Q01959 620 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 TWF1Q12792 350 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 TCEA2Q15560 299 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 ZNF280DQ6N043 979 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 PPP1R21Q6ZMI0 780 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 SYCE1Q8N0S2 351 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 FIBCD1Q8N539 461 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 CEP112Q8N8E3 955 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 USP38Q8NB14 1042 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 SPATA18Q8TC71 538 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 SLC35F5Q8WV83 523 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 COLEC11Q9BWP8 271 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 RYDENQ9NUL5 291 aaKnown RBP6.68□□□□□ -1.34
NFX1-201ENST00000318524 NDFIP2Q9NV92 336 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.68□□□□□ -1.34
NFX1-201ENST00000318524 PPME1Q9Y570 386 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 HCFC2Q9Y5Z7 792 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 SF3B1O75533 1304 aaKnown RBP eCLIP6.68□□□□□ -1.346e-11■■■■■ 91.9
NFX1-201ENST00000318524 TRIM24O15164 1050 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 TRAPPC3O43617 180 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 NEBLO76041 1014 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 TRUB2O95900 331 aaKnown RBP6.68□□□□□ -1.34
NFX1-201ENST00000318524 RFX1P22670 979 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 HPDP32754 393 aaPredicted RBP6.68□□□□□ -1.34
NFX1-201ENST00000318524 PNPLA4P41247 253 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 MAGEA10P43363 369 aaPredicted RBP6.68□□□□□ -1.34
NFX1-201ENST00000318524 RAB27AP51159 221 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 DR1Q01658 176 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 PCSK7Q16549 785 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 RAP1GAP2Q684P5 730 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 CASC4Q6P4E1 433 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 OLFML1Q6UWY5 402 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 DENND5BQ6ZUT9 1274 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 TAC4Q86UU9 113 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 RHOT1Q8IXI2 618 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 TNS4Q8IZW8 715 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 PRELID2Q8N945 189 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 C3orf20Q8ND61 904 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 PABPC5Q96DU9 382 aaKnown RBP6.68□□□□□ -1.34
NFX1-201ENST00000318524 ZNF558Q96NG5 402 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 AP4E1Q9UPM8 1137 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 COL4A6Q14031 1691 aa6.68□□□□□ -1.34
NFX1-201ENST00000318524 TDRD15B5MCY1 1934 aaKnown RBP6.67□□□□□ -1.34
NFX1-201ENST00000318524 SHROOM3Q8TF72 1996 aa6.67□□□□□ -1.34
NFX1-201ENST00000318524 PJA2O43164 708 aa6.67□□□□□ -1.34
NFX1-201ENST00000318524 LTFP02788 710 aa6.67□□□□□ -1.34
NFX1-201ENST00000318524 CYP1A2P05177 515 aa6.67□□□□□ -1.34
NFX1-201ENST00000318524 CNPP09543 421 aaKnown RBP6.67□□□□□ -1.34
NFX1-201ENST00000318524 PIRTP0C851 137 aa6.67□□□□□ -1.34
NFX1-201ENST00000318524 DNAJB1P25685 340 aa6.67□□□□□ -1.34
NFX1-201ENST00000318524 LMAN1P49257 510 aa6.67□□□□□ -1.34
NFX1-201ENST00000318524 KRT17Q04695 432 aa6.67□□□□□ -1.34
NFX1-201ENST00000318524 GPS1Q13098 491 aa6.67□□□□□ -1.34
NFX1-201ENST00000318524 RASIP1Q5U651 963 aa6.67□□□□□ -1.34
NFX1-201ENST00000318524 SPOCD1Q6ZMY3 1216 aa6.67□□□□□ -1.34
NFX1-201ENST00000318524 ARHGAP36Q6ZRI8 547 aa6.67□□□□□ -1.34
NFX1-201ENST00000318524 SLC13A5Q86YT5 568 aaPredicted RBP6.67□□□□□ -1.34
NFX1-201ENST00000318524 CD302Q8IX05 232 aa6.67□□□□□ -1.34
NFX1-201ENST00000318524 LRRC43Q8N309 656 aa6.67□□□□□ -1.34
NFX1-201ENST00000318524 SH2D3CQ8N5H7 860 aa6.67□□□□□ -1.34
NFX1-201ENST00000318524 ARL14EPQ8N8R7 260 aaPredicted RBP6.67□□□□□ -1.34
NFX1-201ENST00000318524 MSANTD4Q8NCY6 345 aa6.67□□□□□ -1.34
NFX1-201ENST00000318524 POF1BQ8WVV4 589 aa6.67□□□□□ -1.34
NFX1-201ENST00000318524 CASKIN2Q8WXE0 1202 aa6.67□□□□□ -1.34
NFX1-201ENST00000318524 WBP2Q969T9 261 aa6.67□□□□□ -1.34
NFX1-201ENST00000318524 SMARCD1Q96GM5 515 aa6.67□□□□□ -1.34
NFX1-201ENST00000318524 IGSF21Q96ID5 467 aa6.67□□□□□ -1.34
NFX1-201ENST00000318524 KLHL5Q96PQ7 755 aa6.67□□□□□ -1.34
NFX1-201ENST00000318524 UBE2OQ9C0C9 1292 aaKnown RBP6.67□□□□□ -1.34
NFX1-201ENST00000318524 CYP3A43Q9HB55 503 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms