RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 POLD1P28340 1107 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 MAPK1P28482 360 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 BCAP31P51572 246 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 ACTR3P61158 418 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 MAD2L1Q13257 205 aaPredicted RBP4.65□□□□□ -1.67
CNOT1-201ENST00000317147 ACAP2Q15057 778 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 ZNF829Q3KNS6 432 aaPredicted RBP4.65□□□□□ -1.67
CNOT1-201ENST00000317147 C6orf89Q6UWU4 347 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 SLC7A3Q8WY07 619 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 LBHD1Q9BQE6 289 aaPredicted RBP4.65□□□□□ -1.67
CNOT1-201ENST00000317147 TMEM245Q9H330 911 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 ZNF556Q9HAH1 456 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 HPS4Q9NQG7 708 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 USTQ9Y2C2 406 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 GREB1LQ9C091 1923 aaPredicted RBP4.65□□□□□ -1.67
CNOT1-201ENST00000317147 DNALI1O14645 258 aaPredicted RBP4.65□□□□□ -1.67
CNOT1-201ENST00000317147 ZBTB24O43167 697 aaPredicted RBP4.65□□□□□ -1.67
CNOT1-201ENST00000317147 ITGAVP06756 1048 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 DMPKQ09013 629 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 FRG1Q14331 258 aaKnown RBP4.65□□□□□ -1.67
CNOT1-201ENST00000317147 ZNF544Q6NX49 715 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 CLNKQ7Z7G1 428 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 NMD3Q96D46 503 aaKnown RBP4.65□□□□□ -1.67
CNOT1-201ENST00000317147 TMEM79Q9BSE2 394 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 INTS13Q9NVM9 706 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 HCFC1P51610 2035 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 ZSCAN5CA6NGD5 496 aaPredicted RBP4.65□□□□□ -1.67
CNOT1-201ENST00000317147 CLDN25C9JDP6 229 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 LZTS3O60299 673 aaPredicted RBP4.65□□□□□ -1.67
CNOT1-201ENST00000317147 MTRF1O75570 445 aaKnown RBP4.65□□□□□ -1.67
CNOT1-201ENST00000317147 PSMA3P25788 255 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 KLRC1P26715 233 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 CDC42EP1Q00587 391 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 GCNT1Q02742 428 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 TRAP1Q12931 704 aaKnown RBP4.65□□□□□ -1.67
CNOT1-201ENST00000317147 KCNT1Q5JUK3 1230 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 SEC14L1Q92503 715 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 RDH12Q96NR8 316 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 TSPAN18Q96SJ8 248 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 ADNPQ9H2P0 1102 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 KIAA1257Q9ULG3 409 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 UNC80Q8N2C7 3258 aa4.65□□□□□ -1.67
CNOT1-201ENST00000317147 MYO15AQ9UKN7 3530 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 CHADO15335 359 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 FAM189A1O60320 539 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 ERBB2P04626 1255 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 CYP2C8P10632 490 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 CD19P15391 556 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 CDC25CP30307 473 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 VAMP7P51809 220 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 EIF2B5Q13144 721 aaKnown RBP4.64□□□□□ -1.67
CNOT1-201ENST00000317147 TNFAIP1Q13829 316 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 NFIL3Q16649 462 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 LONRF1Q17RB8 773 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 ARID3BQ8IVW6 561 aaPredicted RBP4.64□□□□□ -1.67
CNOT1-201ENST00000317147 UNC45BQ8IWX7 931 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 SMYD1Q8NB12 490 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 PROCA1Q8NCQ7 364 aaPredicted RBP4.64□□□□□ -1.67
CNOT1-201ENST00000317147 LSM14AQ8ND56 463 aaKnown RBP4.64□□□□□ -1.67
CNOT1-201ENST00000317147 ZNF507Q8TCN5 953 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 OXER1Q8TDS5 423 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 KIAA1683Q9H0B3 1180 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 TRMT6Q9UJA5 497 aaKnown RBP4.64□□□□□ -1.67
CNOT1-201ENST00000317147 ING4Q9UNL4 249 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 EML6Q6ZMW3 1958 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 CCDC189A1A4V9 331 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 SH3PXD2BA1X283 911 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 FAM172BPA6NC97 362 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 USP17L12C9JPN9 530 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 USP17L21D6R901 530 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 FCHO1O14526 889 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 NCK2O43639 380 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 COQ9O75208 318 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 IFNA14P01570 189 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 ASLP04424 464 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 ITGA2BP08514 1039 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 RASA1P20936 1047 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 ALDH18A1P54886 795 aaKnown RBP4.64□□□□□ -1.67
CNOT1-201ENST00000317147 BCAR1P56945 870 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 CHRNB3Q05901 458 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 SCARF1Q14162 830 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 NCF4Q15080 339 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 KCTD19Q17RG1 926 aaPredicted RBP4.64□□□□□ -1.67
CNOT1-201ENST00000317147 FAM83EQ2M2I3 478 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 C5orf22Q49AR2 442 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 TTBK2Q6IQ55 1244 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 NT5DC3Q86UY8 548 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 DNAAF5Q86Y56 855 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 RHPN2Q8IUC4 686 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 MICU2Q8IYU8 434 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 VPS37AQ8NEZ2 397 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 SUN5Q8TC36 379 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 FBXO25Q8TCJ0 367 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 KLHL3Q9UH77 587 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 PHF24Q9UPV7 400 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 CORO2BQ9UQ03 480 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 PCDHA3Q9Y5H8 950 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 LOC110117498-PIK3R3F6TDL0 507 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 ADSSP30520 456 aa4.64□□□□□ -1.67
CNOT1-201ENST00000317147 ALDH1A3P47895 512 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms