RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 SPTLC1O15269 473 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 OAS1P00973 400 aaKnown RBP14.76□□□□□ -0.05
VRK3-201ENST00000316763 APOC2P02655 101 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 MIPP30301 263 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 RFC2P35250 354 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 GPD2P43304 727 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 ZNF143P52747 638 aaPredicted RBP14.76□□□□□ -0.05
VRK3-201ENST00000316763 TCTN1Q2MV58 587 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 SLC24A5Q71RS6 500 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 TRABD2AQ86V40 505 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 HSPH1Q92598 858 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 KLC4Q9NSK0 619 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 HMGXB4Q9UGU5 601 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 SMG5Q9UPR3 1016 aaKnown RBP14.76□□□□□ -0.05
VRK3-201ENST00000316763 FARP1Q9Y4F1 1045 aaPredicted RBP14.76□□□□□ -0.05
VRK3-201ENST00000316763 SNX9Q9Y5X1 595 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 KPNA7A9QM74 516 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 PRPF4O43172 522 aaKnown RBP eCLIP14.76□□□□□ -0.05
VRK3-201ENST00000316763 RASSF9O75901 435 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 EOMESO95936 686 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 DESP17661 470 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 KRT15P19012 456 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 GPD1P21695 349 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 SLC18A1P54219 525 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 LILRA4P59901 499 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 EIF3EP60228 445 aaKnown RBP14.76□□□□□ -0.05
VRK3-201ENST00000316763 MPP2Q14168 576 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 SPATA21Q7Z572 469 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 GBP7Q8N8V2 638 aaPredicted RBP14.76□□□□□ -0.05
VRK3-201ENST00000316763 ATP11CQ8NB49 1132 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 PYROXD1Q8WU10 500 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 SEPT8Q92599 483 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 SMC6Q96SB8 1091 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 CNPY3Q9BT09 278 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 NT5C1AQ9BXI3 368 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 TRABDQ9H4I3 376 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 MLXIPLQ9NP71 852 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 FETUBQ9UGM5 382 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 ARL2BPQ9Y2Y0 163 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 SCN1AP35498 2009 aa14.75□□□□□ -0.05
VRK3-201ENST00000316763 FOXO6A8MYZ6 492 aa14.75□□□□□ -0.05
VRK3-201ENST00000316763 TAF6P49848 677 aa14.75□□□□□ -0.05
VRK3-201ENST00000316763 SCNN1GP51170 649 aa14.75□□□□□ -0.05
VRK3-201ENST00000316763 NDST1P52848 882 aa14.75□□□□□ -0.05
VRK3-201ENST00000316763 XRCC4Q13426 336 aa14.75□□□□□ -0.05
VRK3-201ENST00000316763 TFDP2Q14188 446 aa14.75□□□□□ -0.05
VRK3-201ENST00000316763 FASTKD3Q14CZ7 662 aaKnown RBP14.75□□□□□ -0.05
VRK3-201ENST00000316763 SOWAHAQ2M3V2 549 aa14.75□□□□□ -0.05
VRK3-201ENST00000316763 SV2CQ496J9 727 aa14.75□□□□□ -0.05
VRK3-201ENST00000316763 OR6B2Q6IFH4 312 aa14.75□□□□□ -0.05
VRK3-201ENST00000316763 LCLAT1Q6UWP7 414 aa14.75□□□□□ -0.05
VRK3-201ENST00000316763 DPH6Q7L8W6 267 aa14.75□□□□□ -0.05
VRK3-201ENST00000316763 CALN1Q9BXU9 219 aa14.75□□□□□ -0.05
VRK3-201ENST00000316763 PSMC3IPQ9P2W1 217 aaPredicted RBP14.75□□□□□ -0.05
VRK3-201ENST00000316763 SAE1Q9UBE0 346 aaPredicted RBP14.75□□□□□ -0.05
VRK3-201ENST00000316763 TSHRP16473 764 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 ATP2A2P16615 1042 aaKnown RBP14.74□□□□□ -0.05
VRK3-201ENST00000316763 GCAP28676 217 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 STIP1P31948 543 aaKnown RBP14.74□□□□□ -0.05
VRK3-201ENST00000316763 GBP2P32456 591 aaPredicted RBP14.74□□□□□ -0.05
VRK3-201ENST00000316763 RPL9P32969 192 aaKnown RBP14.74□□□□□ -0.05
VRK3-201ENST00000316763 RPL22P35268 128 aaKnown RBP14.74□□□□□ -0.05
VRK3-201ENST00000316763 SNX16P57768 344 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 SPRED3Q2MJR0 410 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 HP1BP3Q5SSJ5 553 aaPredicted RBP14.74□□□□□ -0.05
VRK3-201ENST00000316763 MAP7D3Q8IWC1 876 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 NAT8LQ8N9F0 302 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 RNF169Q8NCN4 708 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 UBA3Q8TBC4 463 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 CPT1BQ92523 772 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 MRPL45Q9BRJ2 306 aaKnown RBP14.74□□□□□ -0.05
VRK3-201ENST00000316763 SLC12A4Q9UP95 1085 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 MICAL3Q7RTP6 2002 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 GOLGA8MH3BSY2 632 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 PRPSAP2O60256 369 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 ACRP10323 421 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 PDGFRAP16234 1089 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 GEMIN4P57678 1058 aaKnown RBP14.74□□□□□ -0.05
VRK3-201ENST00000316763 ROR1Q01973 937 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 SF3A3Q12874 501 aaKnown RBP eCLIP14.74□□□□□ -0.05
VRK3-201ENST00000316763 GRIK3Q13003 919 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 SPARCL1Q14515 664 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 KLHL38Q2WGJ6 581 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 ICE2Q659A1 982 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 UNC93AQ86WB7 457 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 ANKMY2Q8IV38 441 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 PDIK1LQ8N165 341 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 APBB2Q92870 758 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 NCAPGQ9BPX3 1015 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 PAIP2Q9BPZ3 127 aaKnown RBP14.74□□□□□ -0.05
VRK3-201ENST00000316763 IL23AQ9NPF7 189 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 HAUS2Q9NVX0 235 aa14.74□□□□□ -0.05
VRK3-201ENST00000316763 CFAP73A6NFT4 308 aa14.73□□□□□ -0.05
VRK3-201ENST00000316763 ENPP3O14638 875 aa14.73□□□□□ -0.05
VRK3-201ENST00000316763 CD48P09326 243 aa14.73□□□□□ -0.05
VRK3-201ENST00000316763 FAM163BP0C2L3 166 aa14.73□□□□□ -0.05
VRK3-201ENST00000316763 RBP3P10745 1247 aa14.73□□□□□ -0.05
VRK3-201ENST00000316763 MNAT1P51948 309 aa14.73□□□□□ -0.05
VRK3-201ENST00000316763 GDF10P55107 478 aa14.73□□□□□ -0.05
VRK3-201ENST00000316763 CDH6P55285 790 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms