RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 SLC26A6Q9BXS9 759 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 ELAC1Q9H777 363 aaKnown RBP4.58□□□□□ -1.68
SMCO3-201ENST00000316048 UBN1Q9NPG3 1134 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 RIMKLBQ9ULI2 386 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 CA14Q9ULX7 337 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 MROH2AA6NES4 1674 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 PIK3C2BO00750 1634 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 PIK3C2GO75747 1445 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 ZBED9Q6R2W3 1325 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 PNMA6EA0A0J9YXQ4 647 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 A6NLC8 198 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 PPM1DO15297 605 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 CBFA2T3O75081 653 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 SOAT2O75908 522 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 NCR1O76036 304 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 SCAF4O95104 1147 aaKnown RBP4.58□□□□□ -1.68
SMCO3-201ENST00000316048 CER1O95813 267 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 ACO1P21399 889 aaKnown RBP4.58□□□□□ -1.68
SMCO3-201ENST00000316048 CFPP27918 469 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 CD6P30203 668 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 MAGEA10P43363 369 aaPredicted RBP4.58□□□□□ -1.68
SMCO3-201ENST00000316048 CXADRP78310 365 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 PDCLQ13371 301 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 DLGAP5Q15398 846 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 GALNTL6Q49A17 601 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 CC2D1BQ5T0F9 858 aaKnown RBP4.58□□□□□ -1.68
SMCO3-201ENST00000316048 GPATCH4Q5T3I0 446 aaKnown RBP4.58□□□□□ -1.68
SMCO3-201ENST00000316048 TTC22Q5TAA0 569 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 SYT13Q7L8C5 426 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 CLNKQ7Z7G1 428 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 ANKRD35Q8N283 1001 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 CEP70Q8NHQ1 597 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 ATG4AQ8WYN0 398 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 SNX19Q92543 992 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 GOLGA1Q92805 767 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 C3orf49Q96BT1 292 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 RNF31Q96EP0 1072 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 WDR24Q96S15 920 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 C17orf80Q9BSJ5 609 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 HELLSQ9NRZ9 838 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 TMOD4Q9NZQ9 345 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 SLC27A6Q9Y2P4 619 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 KIF13AQ9H1H9 1805 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 PPLO60437 1756 aa4.58□□□□□ -1.68
SMCO3-201ENST00000316048 PARD3Q8TEW0 1356 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 OTOL1A6NHN0 477 aaPredicted RBP4.57□□□□□ -1.68
SMCO3-201ENST00000316048 SNX2O60749 519 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 PRKCBP05771 671 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 BMP7P18075 431 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 COMTP21964 271 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 PPIFP30405 207 aaKnown RBP4.57□□□□□ -1.68
SMCO3-201ENST00000316048 NR1H2P55055 460 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 IRX6P78412 446 aaPredicted RBP4.57□□□□□ -1.68
SMCO3-201ENST00000316048 SATB1Q01826 763 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 EIF2B5Q13144 721 aaKnown RBP4.57□□□□□ -1.68
SMCO3-201ENST00000316048 TUBB3Q13509 450 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 SLC12A1Q13621 1099 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 E2F2Q14209 437 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 CYP2A13Q16696 494 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 CERCAMQ5T4B2 595 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 SLC9A4Q6AI14 798 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 MSANTD2Q6P1R3 559 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 FOXR2Q6PJQ5 311 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 MAMDC4Q6UXC1 1216 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 C1QL4Q86Z23 238 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 LRRC56Q8IYG6 542 aaPredicted RBP4.57□□□□□ -1.68
SMCO3-201ENST00000316048 FAM109AQ8N4B1 249 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 RRP36Q96EU6 259 aaKnown RBP4.57□□□□□ -1.68
SMCO3-201ENST00000316048 WWC2-AS2Q96NR7 200 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 WASH6PQ9NQA3 447 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 SYNMO15061 1565 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 SIGLEC1Q9BZZ2 1709 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 PREX1Q8TCU6 1659 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 XDHP47989 1333 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 A0A1W2PS29 197 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 M0QYT0 321 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 PLATP00750 562 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 TK1P04183 234 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 CFIP05156 583 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 PPP3CBP16298 524 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 RBL1P28749 1068 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 MAN2A2P49641 1150 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 PAPOLAP51003 745 aaKnown RBP4.57□□□□□ -1.68
SMCO3-201ENST00000316048 HHEXQ03014 270 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 FPGSQ05932 587 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 CCNIQ14094 377 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 RRP1BQ14684 758 aaKnown RBP4.57□□□□□ -1.68
SMCO3-201ENST00000316048 PKN1Q16512 942 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 NFRKBQ6P4R8 1299 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 PCGF5Q86SE9 256 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 CIR1Q86X95 450 aaPredicted RBP4.57□□□□□ -1.68
SMCO3-201ENST00000316048 NRSN1Q8IZ57 195 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 ABRAQ8N0Z2 381 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 TMEM132CQ8N3T6 1108 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 MBD3L2Q8NHZ7 208 aaPredicted RBP4.57□□□□□ -1.68
SMCO3-201ENST00000316048 Q8TCH9 128 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 BRD8Q9H0E9 1235 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 RNF181Q9P0P0 153 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 KCNE5Q9UJ90 142 aa4.57□□□□□ -1.68
SMCO3-201ENST00000316048 CNTN6Q9UQ52 1028 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms