RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 NSRP1Q9H0G5 558 aaKnown RBP7.92□□□□□ -1.14
TRIM55-202ENST00000315962 CREBZFQ9NS37 354 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 PRG3Q9Y2Y8 225 aaPredicted RBP7.92□□□□□ -1.14
TRIM55-202ENST00000315962 PRUNE2Q8WUY3 3088 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 CCDC189A1A4V9 331 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 C2CD4BA6NLJ0 364 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 AVILO75366 819 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 SUN1O94901 812 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 GPD1P21695 349 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 SDC4P31431 198 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 ABL2P42684 1182 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 TUBP50607 506 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 ACLYP53396 1101 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 NOGQ13253 232 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 KRT81Q14533 505 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 LPIN1Q14693 890 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 ANKRD20A2Q5SQ80 823 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 ANKRD20A1Q5TYW2 823 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 SDHAF4Q5VUM1 108 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 ANKRD20A3Q5VUR7 823 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 RSPH3Q86UC2 560 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 VSIG1Q86XK7 387 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 ZNF280BQ86YH2 543 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 EIF1ADQ8N9N8 165 aaKnown RBP7.92□□□□□ -1.14
TRIM55-202ENST00000315962 UTP4Q969X6 686 aaKnown RBP7.92□□□□□ -1.14
TRIM55-202ENST00000315962 MAK16Q9BXY0 300 aaKnown RBP7.92□□□□□ -1.14
TRIM55-202ENST00000315962 MYLK2Q9H1R3 596 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 DHX35Q9H5Z1 703 aaKnown RBP7.92□□□□□ -1.14
TRIM55-202ENST00000315962 VRTNQ9H8Y1 702 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 KRT82Q9NSB4 513 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 TRPV2Q9Y5S1 764 aa7.92□□□□□ -1.14
TRIM55-202ENST00000315962 BPTFQ12830 3046 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 TCRBV7S3A2A0A539 114 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 C2orf71A6NGG8 1288 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 NT5C1B-RDH14C9J2C7 533 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 ENTPD5O75356 428 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 CSPG5O95196 566 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 TRUB2O95900 331 aaKnown RBP7.91□□□□□ -1.14
TRIM55-202ENST00000315962 CD4P01730 458 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 AMHP03971 560 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 USP17L7P0C7H9 530 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 RARGP13631 454 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 GM2AP17900 193 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 EPHB2P29323 1055 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 GATMP50440 423 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 ZNF143P52747 638 aaPredicted RBP7.91□□□□□ -1.14
TRIM55-202ENST00000315962 ZNF268Q14587 947 aaPredicted RBP7.91□□□□□ -1.14
TRIM55-202ENST00000315962 ITIH4Q14624 930 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 TAF11Q15544 211 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 CYP1B1Q16678 543 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 HADHQ16836 314 aaKnown RBP7.91□□□□□ -1.14
TRIM55-202ENST00000315962 TAOK1Q7L7X3 1001 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 TP53INP2Q8IXH6 220 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 CCDC185Q8N715 623 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 ART4Q93070 314 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 MCRS1Q96EZ8 462 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 PCED1BQ96HM7 432 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 PGLYRP2Q96PD5 576 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 PPP1R10Q96QC0 940 aaKnown RBP7.91□□□□□ -1.14
TRIM55-202ENST00000315962 CRTAC1Q9NQ79 661 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 HOMER3Q9NSC5 361 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 NINJ2Q9NZG7 142 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 NOP53Q9NZM5 478 aaKnown RBP7.91□□□□□ -1.14
TRIM55-202ENST00000315962 DCTN4Q9UJW0 460 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 NAALADL1Q9UQQ1 740 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 RASA4BC9J798 803 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 NRP1O14786 923 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 RASA4O43374 803 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 CREB3O43889 395 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 IGHA2P01877 340 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 PTPN1P18031 435 aaKnown RBP7.91□□□□□ -1.14
TRIM55-202ENST00000315962 CETN2P41208 172 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 ARPP19P56211 112 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 HDAC4P56524 1084 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 BASP1P80723 227 aaKnown RBP7.91□□□□□ -1.14
TRIM55-202ENST00000315962 CDC42EP1Q00587 391 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 SLC6A3Q01959 620 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 MBTPS1Q14703 1052 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 CCNG2Q16589 344 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 KYAT1Q16773 422 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 ANKRD22Q5VYY1 191 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 PAQR9Q6ZVX9 377 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 CYP4V2Q6ZWL3 525 aaPredicted RBP7.91□□□□□ -1.14
TRIM55-202ENST00000315962 APBB1IPQ7Z5R6 666 aaPredicted RBP7.91□□□□□ -1.14
TRIM55-202ENST00000315962 TMCO2Q7Z6W1 182 aaPredicted RBP7.91□□□□□ -1.14
TRIM55-202ENST00000315962 SCAMP5Q8TAC9 235 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.91□□□□□ -1.14
TRIM55-202ENST00000315962 RBM41Q96IZ5 413 aaKnown RBP7.91□□□□□ -1.14
TRIM55-202ENST00000315962 TRIM56Q9BRZ2 755 aaKnown RBP7.91□□□□□ -1.14
TRIM55-202ENST00000315962 PITPNM3Q9BZ71 974 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 ZCWPW1Q9H0M4 648 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 GRID1Q9ULK0 1009 aa7.91□□□□□ -1.14
TRIM55-202ENST00000315962 MAGED2Q9UNF1 606 aaPredicted RBP7.91□□□□□ -1.14
TRIM55-202ENST00000315962 SRRM3A6NNA2 597 aaPredicted RBP7.9□□□□□ -1.14
TRIM55-202ENST00000315962 INHAP05111 366 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 RBP3P10745 1247 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 HSPA6P17066 643 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 BDNFP23560 247 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 VEGFBP49765 207 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 WDR4P57081 412 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms