RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 NRDE2Q9H7Z3 1164 aa7.29□□□□□ -1.24
LYSMD3-201ENST00000315948 NMUR1Q9HB89 426 aa7.29□□□□□ -1.24
LYSMD3-201ENST00000315948 SLC38A7Q9NVC3 462 aa7.29□□□□□ -1.24
LYSMD3-201ENST00000315948 KIAA1257Q9ULG3 409 aa7.29□□□□□ -1.24
LYSMD3-201ENST00000315948 KRT7P08729 469 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 CTCFP49711 727 aaPredicted RBP7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 CDK7P50613 346 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 MAGOHP61326 146 aaKnown RBP7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 BASP1P80723 227 aaKnown RBP7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 FAAP100Q0VG06 881 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 CALCOCO2Q13137 446 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 RTP2Q5QGT7 225 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 FAM171A1Q5VUB5 890 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 BBS12Q6ZW61 710 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 POLNQ7Z5Q5 900 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 MREGQ8N565 214 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 AUTS2Q8WXX7 1259 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 RNF157Q96PX1 679 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 PKMYT1Q99640 499 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 PLVAPQ9BX97 442 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 ATP11BQ9Y2G3 1177 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 MUC3AQ02505 3323 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 TDRD15B5MCY1 1934 aaKnown RBP7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 H7C0C1 242 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 GAS8O95995 478 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 ACRP10323 421 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 SELPP16109 830 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 ATP5OP48047 213 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 SEC24CP53992 1094 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 GSCP56915 257 aaPredicted RBP7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 CRADDP78560 199 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 TAP1Q03518 808 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 IFFO1Q0D2I5 559 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 GRIK3Q13003 919 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 FAM26DQ5JW98 314 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 DARS2Q6PI48 645 aaKnown RBP7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 ZNF771Q7L3S4 317 aaPredicted RBP7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 CPT1BQ92523 772 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 CSPG4P5Q96PW8 444 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 RBM15Q96T37 977 aaKnown RBP eCLIP7.28□□□□□ -1.249e-7■■■■□ 22.9
LYSMD3-201ENST00000315948 FAM107BQ9H098 131 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 KIF9Q9HAQ2 790 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 PAK6Q9NQU5 681 aaPredicted RBP7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 DDIT4Q9NX09 232 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 IL1RAPL1Q9NZN1 696 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 KCNK1O00180 336 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 CAPN9O14815 690 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 KCNN4O15554 427 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 MFSD11O43934 449 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 HSPA6P17066 643 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 GRIK1P39086 918 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 MATKP42679 507 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 SLC11A1P49279 550 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 DAOAP59103 153 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 YWHAHQ04917 246 aaPredicted RBP7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 INTS6LQ5JSJ4 861 aaKnown RBP7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 NPWQ8N729 165 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 CELF6Q96J87 481 aaKnown RBP7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 SIK2Q9H0K1 926 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 PABPC3Q9H361 631 aaKnown RBP7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 C12orf65Q9H3J6 166 aaKnown RBP7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 HIPK3Q9H422 1215 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 SAYSD1Q9NPB0 183 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 NDFIP2Q9NV92 336 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 NINJ2Q9NZG7 142 aa7.28□□□□□ -1.24
LYSMD3-201ENST00000315948 TBKBP1A7MCY6 615 aa7.27□□□□□ -1.24
LYSMD3-201ENST00000315948 MOCS2O96007 188 aaPredicted RBP7.27□□□□□ -1.24
LYSMD3-201ENST00000315948 SRGAP2BP0DMP2 458 aa7.27□□□□□ -1.24
LYSMD3-201ENST00000315948 ODC1P11926 461 aa7.27□□□□□ -1.24
LYSMD3-201ENST00000315948 SSTR1P30872 391 aa7.27□□□□□ -1.24
LYSMD3-201ENST00000315948 PCK1P35558 622 aa7.27□□□□□ -1.24
LYSMD3-201ENST00000315948 IRAK1P51617 712 aa7.27□□□□□ -1.24
LYSMD3-201ENST00000315948 DSC1Q08554 894 aa7.27□□□□□ -1.24
LYSMD3-201ENST00000315948 TAZQ16635 292 aa7.27□□□□□ -1.24
LYSMD3-201ENST00000315948 ERMARDQ5T6L9 678 aa7.27□□□□□ -1.24
LYSMD3-201ENST00000315948 SPRED2Q7Z698 418 aa7.27□□□□□ -1.24
LYSMD3-201ENST00000315948 ZBED8Q8IZ13 594 aa7.27□□□□□ -1.24
LYSMD3-201ENST00000315948 TTC16Q8NEE8 873 aa7.27□□□□□ -1.24
LYSMD3-201ENST00000315948 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.27□□□□□ -1.24
LYSMD3-201ENST00000315948 P3H4Q92791 437 aa7.27□□□□□ -1.24
LYSMD3-201ENST00000315948 CASD1Q96PB1 797 aa7.27□□□□□ -1.24
LYSMD3-201ENST00000315948 MAK16Q9BXY0 300 aaKnown RBP7.27□□□□□ -1.24
LYSMD3-201ENST00000315948 USP29Q9HBJ7 922 aa7.27□□□□□ -1.24
LYSMD3-201ENST00000315948 WDR6Q9NNW5 1121 aaKnown RBP7.27□□□□□ -1.24
LYSMD3-201ENST00000315948 MARCH5Q9NX47 278 aa7.27□□□□□ -1.24
LYSMD3-201ENST00000315948 PHF24Q9UPV7 400 aa7.27□□□□□ -1.24
LYSMD3-201ENST00000315948 COL6A3P12111 3177 aa7.27□□□□□ -1.25
LYSMD3-201ENST00000315948 ENDOD1O94919 500 aa7.27□□□□□ -1.25
LYSMD3-201ENST00000315948 VNN2O95498 520 aa7.27□□□□□ -1.25
LYSMD3-201ENST00000315948 METTL18O95568 372 aa7.27□□□□□ -1.25
LYSMD3-201ENST00000315948 ZBED1O96006 694 aa7.27□□□□□ -1.25
LYSMD3-201ENST00000315948 SETSIPP0DME0 302 aa7.27□□□□□ -1.25
LYSMD3-201ENST00000315948 VAV1P15498 845 aa7.27□□□□□ -1.25
LYSMD3-201ENST00000315948 CAPN2P17655 700 aa7.27□□□□□ -1.25
LYSMD3-201ENST00000315948 SLC5A3P53794 718 aa7.27□□□□□ -1.25
LYSMD3-201ENST00000315948 BSPRYQ5W0U4 402 aa7.27□□□□□ -1.25
LYSMD3-201ENST00000315948 HIBCHQ6NVY1 386 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms