RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 COPAP53621 1224 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 RHBDL3P58872 404 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 TRIP10Q15642 601 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 NT5DC1Q5TFE4 455 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 GRAMD4Q6IC98 578 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 CATSPERGQ6ZRH7 1159 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 ZFPM1Q8IX07 1006 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 AVENQ9NQS1 362 aaPredicted RBP12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 BLOC1S4Q9NUP1 217 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 GPRC5DQ9NZD1 345 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 FAM198AQ9UFP1 575 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 SOX13Q9UN79 622 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 IGF2BP3O00425 579 aaKnown RBP eCLIP12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 CAND2O75155 1236 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 ACAT1P24752 427 aaKnown RBP12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 ADCYAP1R1P41586 468 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 SCNN1BP51168 640 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 ACAP1Q15027 740 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 NBPF20Q3BBV1 942 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 TMEM86AQ8N2M4 240 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 COLGALT1Q8NBJ5 622 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 HES6Q96HZ4 224 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 TMEM134Q9H6X4 195 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 RUVBL2Q9Y230 463 aaKnown RBP12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 LACTBL1A8MY62 500 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 F8W810 466 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 SLCO1B7G3V0H7 640 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 HMGCRP04035 888 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 ERFP50548 548 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 SEC24CP53992 1094 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 PTGISQ16647 500 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 NLRP9Q7RTR0 991 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 STRA8Q7Z7C7 330 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 ANKRD7Q92527 254 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 EDEM1Q92611 657 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 TINF2Q9BSI4 451 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 PORCNQ9H237 461 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 H2AFY2Q9P0M6 372 aaPredicted RBP12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 UBA1P22314 1058 aaKnown RBP12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 EIF4BP23588 611 aaKnown RBP12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 GRK2P25098 689 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 SERPINB10P48595 397 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 PRIM2P49643 509 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 PMS1P54277 932 aaKnown RBP12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 NCALDP61601 193 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 PAFAH2Q99487 392 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 GANQ9H2C0 597 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 CDC42EP4Q9H3Q1 356 aaKnown RBP12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 UXTQ9UBK9 157 aaPredicted RBP12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 TRIM17Q9Y577 477 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 KRT87PA6NCN2 255 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 ZBTB39O15060 712 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 SEC24DO94855 1032 aaPredicted RBP12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 GRK3P35626 688 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 STARD3Q14849 445 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 ERAP2Q6P179 960 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 LAYNQ6UX15 382 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 PNKPQ96T60 521 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 PRKD2Q9BZL6 878 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 NCKIPSDQ9NZQ3 722 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 MROH7Q68CQ1 1323 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 NRCAMQ92823 1304 aa12.32□□□□□ -0.44
AMBRA1-201ENST00000314845 AMHP03971 560 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 CDH17Q12864 832 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 HORMAD1Q86X24 394 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 THUMPD3Q9BV44 507 aaKnown RBP12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 GPAMQ9HCL2 828 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 C6orf203Q9P0P8 240 aaPredicted RBP12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 TRHDEQ9UKU6 1024 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 RAD54BQ9Y620 910 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 PLA2G6O60733 806 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 SKAP2O75563 359 aaPredicted RBP12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 KLRC2P26717 231 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 PTENP60484 403 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 CNTN1Q12860 1018 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 LRRC23Q53EV4 343 aaPredicted RBP12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 TJAP1Q5JTD0 557 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 RNF208Q9H0X6 261 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 THG1LQ9NWX6 298 aaKnown RBP12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 VANGL2Q9ULK5 521 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 SNCAIPQ9Y6H5 919 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 CKBP12277 381 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 TCN1P20061 433 aaPredicted RBP12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 NR2C2P49116 596 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 ITGA9Q13797 1035 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 KDM7AQ6ZMT4 941 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 CCDC33Q8N5R6 958 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 SLC2A14Q8TDB8 520 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 MTMR9Q96QG7 549 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 DUSP9Q99956 384 aaKnown RBP12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 FUCA2Q9BTY2 467 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 WDR18Q9BV38 432 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 COPS7BQ9H9Q2 264 aaPredicted RBP12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 IL1RL2Q9HB29 575 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 ATP13A1Q9HD20 1204 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 MYPNQ86TC9 1320 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 XYLBO75191 536 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 THRAP10827 490 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 C11orf96Q7Z7L8 435 aa12.31□□□□□ -0.44
AMBRA1-201ENST00000314845 EPS8L3Q8TE67 593 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms