RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 MKS1Q9NXB0 559 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 CPSF3Q9UKF6 684 aaKnown RBP13.93□□□□□ -0.18
SKA3-202ENST00000314759 TRPC5Q9UL62 973 aaPredicted RBP13.93□□□□□ -0.18
SKA3-202ENST00000314759 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.93□□□□□ -0.18
SKA3-202ENST00000314759 SLC15A5A6NIM6 579 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 MED7O43513 233 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 APOEP02649 317 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 OSBPP22059 807 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 TRMT10BQ6PF06 316 aaKnown RBP13.93□□□□□ -0.18
SKA3-202ENST00000314759 KYAT3Q6YP21 454 aaKnown RBP13.93□□□□□ -0.18
SKA3-202ENST00000314759 UNC5AQ6ZN44 842 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 TMEM130Q8N3G9 435 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 LRRN4Q8WUT4 740 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 PRPF31Q8WWY3 499 aaKnown RBP13.93□□□□□ -0.18
SKA3-202ENST00000314759 CENPKQ9BS16 269 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 ZNF277Q9NRM2 450 aaPredicted RBP13.93□□□□□ -0.18
SKA3-202ENST00000314759 PHF24Q9UPV7 400 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 PSME4Q14997 1843 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 OGTO15294 1046 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 OPHN1O60890 802 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 MAP3K6O95382 1288 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 C6orf222P0C671 652 aaPredicted RBP13.92□□□□□ -0.18
SKA3-202ENST00000314759 RBL1P28749 1068 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 CRHR1P34998 444 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 SCNN1BP51168 640 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 PDE1BQ01064 536 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 ACAP1Q15027 740 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 TBCCQ15814 346 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 SFT2D3Q587I9 215 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 LPCAT4Q643R3 524 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 TRNP1Q6NT89 227 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 PLD5Q8N7P1 536 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 MCRS1Q96EZ8 462 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 TEPSINQ96N21 525 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 FAM210AQ96ND0 272 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 TWNKQ96RR1 684 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 ACO2Q99798 780 aaKnown RBP13.92□□□□□ -0.18
SKA3-202ENST00000314759 MRPL4Q9BYD3 311 aaKnown RBP13.92□□□□□ -0.18
SKA3-202ENST00000314759 SDCBP2Q9H190 292 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 ASNSD1Q9NWL6 643 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 ATXN10Q9UBB4 475 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 HMGXB4Q9UGU5 601 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 ZNF214Q9UL59 606 aaPredicted RBP13.92□□□□□ -0.18
SKA3-202ENST00000314759 KRT38O76015 456 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 AOC1P19801 751 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 OSTNP61366 133 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 SLC25A3Q00325 362 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 WASHC5Q12768 1159 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 FSTL1Q12841 308 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 STX3Q13277 289 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 TFDP2Q14188 446 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 TARBP2Q15633 366 aaKnown RBP13.92□□□□□ -0.18
SKA3-202ENST00000314759 FAM47CQ5HY64 1035 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 FAM102AQ5T9C2 384 aaPredicted RBP13.92□□□□□ -0.18
SKA3-202ENST00000314759 KRT27Q7Z3Y8 459 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 SATL1Q86VE3 508 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 ADGRF2Q8IZF7 708 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 STKLD1Q8NE28 680 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 PYDC1Q8WXC3 89 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 PPP2R3CQ969Q6 453 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 DTNBP1Q96EV8 351 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 ZBED3Q96IU2 234 aaPredicted RBP13.92□□□□□ -0.18
SKA3-202ENST00000314759 RNF157Q96PX1 679 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 SOX13Q9UN79 622 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 SH3BP1Q9Y3L3 701 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 SLC4A7Q9Y6M7 1214 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 FER1L6Q2WGJ9 1857 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 COL4A5P29400 1685 aa13.92□□□□□ -0.18
SKA3-202ENST00000314759 SORBS2O94875 1100 aaKnown RBP13.91□□□□□ -0.18
SKA3-202ENST00000314759 IL4RP24394 825 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 ZNF143P52747 638 aaPredicted RBP13.91□□□□□ -0.18
SKA3-202ENST00000314759 IRX4P78413 519 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 C15orf59Q2T9L4 293 aaPredicted RBP13.91□□□□□ -0.18
SKA3-202ENST00000314759 FLAD1Q8NFF5 587 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 RAB3IL1Q8TBN0 382 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 NAT14Q8WUY8 206 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 APBB2Q92870 758 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 RTP4Q96DX8 246 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 MMP19Q99542 508 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 ADPGKQ9BRR6 497 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 FRMD8Q9BZ67 464 aaPredicted RBP13.91□□□□□ -0.18
SKA3-202ENST00000314759 THAP1Q9NVV9 213 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 HEY1Q9Y5J3 304 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 BIRC5O15392 142 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 MICAL2O94851 1124 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 GSRP00390 522 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 KRT19P08727 400 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 GABRB2P47870 512 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 TUBB3Q13509 450 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 RASSF3Q86WH2 238 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.91□□□□□ -0.18
SKA3-202ENST00000314759 NMD3Q96D46 503 aaKnown RBP13.91□□□□□ -0.18
SKA3-202ENST00000314759 ZNF778Q96MU6 729 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 PCYT2Q99447 389 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 APOL6Q9BWW8 343 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 XAB2Q9HCS7 855 aaKnown RBP13.91□□□□□ -0.18
SKA3-202ENST00000314759 S100A14Q9HCY8 104 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 CLIC5Q9NZA1 410 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 COMMD3-BMI1R4GMX3 469 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 PIK3R2O00459 728 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms