RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 IGDCC3Q8IVU1 814 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 SERPINB12Q96P63 405 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 PAIP2Q9BPZ3 127 aaKnown RBP12.92□□□□□ -0.34
RNF4-201ENST00000314289 TMEM109Q9BVC6 243 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 CEP41Q9BYV8 373 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 ROPN1BQ9BZX4 212 aaPredicted RBP12.92□□□□□ -0.34
RNF4-201ENST00000314289 ROPN1Q9HAT0 212 aaPredicted RBP12.92□□□□□ -0.34
RNF4-201ENST00000314289 CRTAC1Q9NQ79 661 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 KRT82Q9NSB4 513 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 CHMP2BQ9UQN3 213 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 Q9Y3F1 56 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 APOL1O14791 398 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 CA12O43570 354 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 ENDOD1O94919 500 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 IGHA2P01877 340 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 THP07101 528 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 VIMP08670 466 aaKnown RBP12.91□□□□□ -0.34
RNF4-201ENST00000314289 PRKAR2AP13861 404 aaKnown RBP12.91□□□□□ -0.34
RNF4-201ENST00000314289 GOT1P17174 413 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 AMPD1P23109 780 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 CYP2F1P24903 491 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 GCAP28676 217 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 PNPLA4P41247 253 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 ELF3P78545 371 aaPredicted RBP12.91□□□□□ -0.34
RNF4-201ENST00000314289 SLC10A2Q12908 348 aaPredicted RBP12.91□□□□□ -0.34
RNF4-201ENST00000314289 MFSD5Q6N075 450 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 DSTYKQ6XUX3 929 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 GPRIN1Q7Z2K8 1008 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 TBC1D1Q86TI0 1168 aaPredicted RBP12.91□□□□□ -0.34
RNF4-201ENST00000314289 MAP7D3Q8IWC1 876 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 PPIL6Q8IXY8 311 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 C4orf33Q8N1A6 199 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 FBXO36Q8NEA4 188 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 PYROXD1Q8WU10 500 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 TNIP3Q96KP6 325 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 TRIM56Q9BRZ2 755 aaKnown RBP12.91□□□□□ -0.34
RNF4-201ENST00000314289 TACO1Q9BSH4 297 aaKnown RBP12.91□□□□□ -0.34
RNF4-201ENST00000314289 CNOT10Q9H9A5 744 aaKnown RBP12.91□□□□□ -0.34
RNF4-201ENST00000314289 SPC25Q9HBM1 224 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 NOD2Q9HC29 1040 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 RAB6BQ9NRW1 208 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 PADI3Q9ULW8 664 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 AP4E1Q9UPM8 1137 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 EFR3BQ9Y2G0 817 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 DCAF8L1A6NGE4 600 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 CCT8L1PA6NM43 557 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 RASA4BC9J798 803 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 RASA4O43374 803 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 ATP6V1G2O95670 118 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 YY1P25490 414 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 BRCC3P46736 316 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 SULT1E1P49888 294 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 SREBF2Q12772 1141 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 BOLA3Q53S33 107 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 TNFAIP8L3Q5GJ75 292 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 CLEC20AQ6ZU45 233 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 LRRC34Q8IZ02 419 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 ANKS4BQ8N8V4 417 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 NAT8LQ8N9F0 302 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 ELAC2Q9BQ52 826 aaKnown RBP12.91□□□□□ -0.34
RNF4-201ENST00000314289 SENP6Q9GZR1 1112 aaPredicted RBP12.91□□□□□ -0.34
RNF4-201ENST00000314289 RNF186Q9NXI6 227 aa12.91□□□□□ -0.34
RNF4-201ENST00000314289 ZNF638Q14966 1978 aaKnown RBP12.91□□□□□ -0.34
RNF4-201ENST00000314289 PDCD11Q14690 1871 aaKnown RBP12.9□□□□□ -0.34
RNF4-201ENST00000314289 TTC3P53804 2025 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 NRP1O14786 923 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 PAX7P23759 505 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 L1CAMP32004 1257 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 SLC8A1P32418 973 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 IFRD2Q12894 506 aaPredicted RBP12.9□□□□□ -0.34
RNF4-201ENST00000314289 ZKSCAN8Q15776 578 aaPredicted RBP12.9□□□□□ -0.34
RNF4-201ENST00000314289 SMAD1Q15797 465 aaKnown RBP12.9□□□□□ -0.34
RNF4-201ENST00000314289 PKN2Q16513 984 aaKnown RBP12.9□□□□□ -0.34
RNF4-201ENST00000314289 LACTB2Q53H82 288 aaPredicted RBP12.9□□□□□ -0.34
RNF4-201ENST00000314289 C3orf62Q6ZUJ4 267 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 TAOK1Q7L7X3 1001 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 CCDC63Q8NA47 563 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 KCTD15Q96SI1 283 aaPredicted RBP12.9□□□□□ -0.34
RNF4-201ENST00000314289 LRRC4Q9HBW1 653 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 PIH1D1Q9NWS0 290 aaKnown RBP12.9□□□□□ -0.34
RNF4-201ENST00000314289 NOD1Q9Y239 953 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 CLUHO75153 1309 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 CREB3O43889 395 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 B3GAT3O94766 335 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 SETSIPP0DME0 302 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 KRT15P19012 456 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 TKTL1P51854 596 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 INHBEP58166 350 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 TFDP2Q14188 446 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 SLC26A9Q7LBE3 791 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 SERINC5Q86VE9 423 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 TP53INP2Q8IXH6 220 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 FAF2Q96CS3 445 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 STAMBPL1Q96FJ0 436 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 PCED1BQ96HM7 432 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 KLF6Q99612 283 aaPredicted RBP12.9□□□□□ -0.34
RNF4-201ENST00000314289 KDM4CQ9H3R0 1056 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 USP29Q9HBJ7 922 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 UBN1Q9NPG3 1134 aa12.9□□□□□ -0.34
RNF4-201ENST00000314289 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms