RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 GAS2L3Q86XJ1 694 aa12.62□□□□□ -0.39
SCFD1-201ENST00000311943 SUGP1Q8IWZ8 645 aaKnown RBP12.62□□□□□ -0.39
SCFD1-201ENST00000311943 OVCA2Q8WZ82 227 aa12.62□□□□□ -0.39
SCFD1-201ENST00000311943 ERGIC2Q96RQ1 377 aa12.62□□□□□ -0.39
SCFD1-201ENST00000311943 UBXN6Q9BZV1 441 aa12.62□□□□□ -0.39
SCFD1-201ENST00000311943 OBP2AQ9NY56 170 aa12.62□□□□□ -0.39
SCFD1-201ENST00000311943 XPO7Q9UIA9 1087 aaKnown RBP12.62□□□□□ -0.39
SCFD1-201ENST00000311943 CLEC4EQ9ULY5 219 aa12.62□□□□□ -0.39
SCFD1-201ENST00000311943 MUC6Q6W4X9 2439 aa12.62□□□□□ -0.39
SCFD1-201ENST00000311943 WDR87Q6ZQQ6 2873 aa12.62□□□□□ -0.39
SCFD1-201ENST00000311943 A0A1B0GTH6 734 aa12.62□□□□□ -0.39
SCFD1-201ENST00000311943 GOLGA6L7A0A1B0GV03 622 aa12.62□□□□□ -0.39
SCFD1-201ENST00000311943 SLC12A8A0AV02 714 aa12.62□□□□□ -0.39
SCFD1-201ENST00000311943 SMTNL1A8MU46 457 aa12.62□□□□□ -0.39
SCFD1-201ENST00000311943 SERPINC1P01008 464 aa12.62□□□□□ -0.39
SCFD1-201ENST00000311943 GALK1P51570 392 aa12.62□□□□□ -0.39
SCFD1-201ENST00000311943 FAM183BPQ6ZVS7 135 aa12.62□□□□□ -0.39
SCFD1-201ENST00000311943 RSRC2Q7L4I2 434 aaKnown RBP12.62□□□□□ -0.39
SCFD1-201ENST00000311943 BAP1Q92560 729 aa12.62□□□□□ -0.39
SCFD1-201ENST00000311943 FAM149B1Q96BN6 582 aa12.62□□□□□ -0.39
SCFD1-201ENST00000311943 FAM124BQ9H5Z6 455 aaPredicted RBP12.62□□□□□ -0.39
SCFD1-201ENST00000311943 EHD2Q9NZN4 543 aa12.62□□□□□ -0.39
SCFD1-201ENST00000311943 IFNKQ9P0W0 207 aa12.62□□□□□ -0.39
SCFD1-201ENST00000311943 EGFP01133 1207 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 CHRNB1P11230 501 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 RFX1P22670 979 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 KRT9P35527 623 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 SOX5P35711 763 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 OPRD1P41143 372 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 PPP3CCP48454 512 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 IFNAR2P48551 515 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 SLC8A3P57103 927 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 FMO1Q01740 532 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 PFKPQ01813 784 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 DHCR24Q15392 516 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 SKOR2Q2VWA4 1001 aaPredicted RBP12.61□□□□□ -0.39
SCFD1-201ENST00000311943 ITPRIPL2Q3MIP1 535 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 EMC10Q5UCC4 262 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 NAA35Q5VZE5 725 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 BTBD8Q5XKL5 378 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 FSTL4Q6MZW2 842 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 TRNP1Q6NT89 227 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 LRSAM1Q6UWE0 723 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 DENND1CQ8IV53 801 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 MAML2Q8IZL2 1156 aaPredicted RBP12.61□□□□□ -0.39
SCFD1-201ENST00000311943 NEK11Q8NG66 645 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 CPLX3Q8WVH0 158 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 DNASE1L2Q92874 299 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 LMAN1LQ9HAT1 526 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 THG1LQ9NWX6 298 aaKnown RBP12.61□□□□□ -0.39
SCFD1-201ENST00000311943 COMMD8Q9NX08 183 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 MARCH2Q9P0N8 246 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 SH3BP1Q9Y3L3 701 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 MIA3Q5JRA6 1907 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 SYNJ2BP-COX16A0A087WUM0 186 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 GGCXP38435 758 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 RPL34P49207 117 aaKnown RBP12.61□□□□□ -0.39
SCFD1-201ENST00000311943 TUBP50607 506 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 SGSHP51688 502 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 RNASE9P60153 205 aaKnown RBP12.61□□□□□ -0.39
SCFD1-201ENST00000311943 TMEM110Q86TL2 294 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 FMNL3Q8IVF7 1028 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 E2F7Q96AV8 911 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 PPP1R13BQ96KQ4 1090 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 SPAG5Q96R06 1193 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 KIF9Q9HAQ2 790 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 CNGB3Q9NQW8 809 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 TMPRSS4Q9NRS4 437 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 TAS2R14Q9NYV8 317 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 COX16Q9P0S2 106 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 DNMT3LQ9UJW3 386 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 PCDHGC3Q9UN70 934 aa12.61□□□□□ -0.39
SCFD1-201ENST00000311943 LRRC53A6NM62 1247 aa12.6□□□□□ -0.39
SCFD1-201ENST00000311943 TSPAN3O60637 253 aa12.6□□□□□ -0.39
SCFD1-201ENST00000311943 LTFP02788 710 aa12.6□□□□□ -0.39
SCFD1-201ENST00000311943 SKILP12757 684 aa12.6□□□□□ -0.39
SCFD1-201ENST00000311943 NCAM1P13591 858 aa12.6□□□□□ -0.39
SCFD1-201ENST00000311943 CORO1AP31146 461 aaKnown RBP12.6□□□□□ -0.39
SCFD1-201ENST00000311943 ATXN1P54253 815 aaKnown RBP12.6□□□□□ -0.39
SCFD1-201ENST00000311943 MTAPQ13126 283 aa12.6□□□□□ -0.39
SCFD1-201ENST00000311943 ZNF852Q6ZMS4 543 aa12.6□□□□□ -0.39
SCFD1-201ENST00000311943 HSFY1Q96LI6 401 aa12.6□□□□□ -0.39
SCFD1-201ENST00000311943 XPO4Q9C0E2 1151 aaKnown RBP12.6□□□□□ -0.39
SCFD1-201ENST00000311943 CLIC5Q9NZA1 410 aa12.6□□□□□ -0.39
SCFD1-201ENST00000311943 AGO1Q9UL18 857 aaKnown RBP12.6□□□□□ -0.39
SCFD1-201ENST00000311943 MED7O43513 233 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 TPM2P07951 284 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 PBX1P40424 430 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 CLCN5P51795 746 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 SEC13P55735 322 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 UBASH3AP57075 661 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 PRKCQQ04759 706 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 KDSRQ06136 332 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 OR6B2Q6IFH4 312 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 OLFML1Q6UWY5 402 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 Q6ZNB5 142 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 TOGARAM2Q6ZUX3 1019 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 TAC4Q86UU9 113 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 ANKRD20A12PQ8NF67 263 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 DQX1Q8TE96 717 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms