RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 USP33Q8TEY7 942 aa17.11■□□□□ 0.33
LSM1-201ENST00000311351 RUBCNQ92622 972 aa17.11■□□□□ 0.33
LSM1-201ENST00000311351 ACDQ96AP0 544 aa17.11■□□□□ 0.33
LSM1-201ENST00000311351 PNKPQ96T60 521 aa17.11■□□□□ 0.33
LSM1-201ENST00000311351 UBE2TQ9NPD8 197 aaPredicted RBP17.11■□□□□ 0.33
LSM1-201ENST00000311351 ARHGEF4Q9NR80 690 aa17.11■□□□□ 0.33
LSM1-201ENST00000311351 NCDNQ9UBB6 729 aa17.11■□□□□ 0.33
LSM1-201ENST00000311351 KIAA1257Q9ULG3 409 aa17.11■□□□□ 0.33
LSM1-201ENST00000311351 CEP250Q9BV73 2442 aa17.11■□□□□ 0.33
LSM1-201ENST00000311351 NEDD8-MDP1E9PL57 170 aa17.1■□□□□ 0.33
LSM1-201ENST00000311351 TRIM24O15164 1050 aa17.1■□□□□ 0.33
LSM1-201ENST00000311351 GABBR2O75899 941 aa17.1■□□□□ 0.33
LSM1-201ENST00000311351 KAT7O95251 611 aa17.1■□□□□ 0.33
LSM1-201ENST00000311351 APODP05090 189 aa17.1■□□□□ 0.33
LSM1-201ENST00000311351 CHRM1P11229 460 aaPredicted RBP17.1■□□□□ 0.33
LSM1-201ENST00000311351 LCP1P13796 627 aa17.1■□□□□ 0.33
LSM1-201ENST00000311351 SLC9A1P19634 815 aa17.1■□□□□ 0.33
LSM1-201ENST00000311351 HOXA6P31267 233 aa17.1■□□□□ 0.33
LSM1-201ENST00000311351 EIF2DP41214 584 aaKnown RBP17.1■□□□□ 0.33
LSM1-201ENST00000311351 DMC1Q14565 340 aa17.1■□□□□ 0.33
LSM1-201ENST00000311351 TPGS1Q6ZTW0 290 aa17.1■□□□□ 0.33
LSM1-201ENST00000311351 WDR5BQ86VZ2 330 aa17.1■□□□□ 0.33
LSM1-201ENST00000311351 ZNF276Q8N554 614 aa17.1■□□□□ 0.33
LSM1-201ENST00000311351 GPT2Q8TD30 523 aa17.1■□□□□ 0.33
LSM1-201ENST00000311351 BHMTQ93088 406 aa17.1■□□□□ 0.33
LSM1-201ENST00000311351 IPO9Q96P70 1041 aaKnown RBP17.1■□□□□ 0.33
LSM1-201ENST00000311351 CDK5RAP1Q96SZ6 601 aaKnown RBP17.1■□□□□ 0.33
LSM1-201ENST00000311351 ZDHHC4Q9NPG8 344 aa17.1■□□□□ 0.33
LSM1-201ENST00000311351 MARCH2Q9P0N8 246 aa17.1■□□□□ 0.33
LSM1-201ENST00000311351 DMXL1Q9Y485 3027 aa17.1■□□□□ 0.33
LSM1-201ENST00000311351 YJEFN3A6XGL0 299 aa17.09■□□□□ 0.33
LSM1-201ENST00000311351 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.09■□□□□ 0.33
LSM1-201ENST00000311351 E7ENQ6 273 aa17.09■□□□□ 0.33
LSM1-201ENST00000311351 TULP3O75386 442 aa17.09■□□□□ 0.33
LSM1-201ENST00000311351 KLKB1P03952 638 aa17.09■□□□□ 0.33
LSM1-201ENST00000311351 CNGA2Q16280 664 aa17.09■□□□□ 0.33
LSM1-201ENST00000311351 BTBD8Q5XKL5 378 aa17.09■□□□□ 0.33
LSM1-201ENST00000311351 PMF1Q6P1K2 205 aa17.09■□□□□ 0.33
LSM1-201ENST00000311351 GBP6Q6ZN66 633 aa17.09■□□□□ 0.33
LSM1-201ENST00000311351 SYT13Q7L8C5 426 aa17.09■□□□□ 0.33
LSM1-201ENST00000311351 KIAA2013Q8IYS2 634 aa17.09■□□□□ 0.33
LSM1-201ENST00000311351 CCDC33Q8N5R6 958 aa17.09■□□□□ 0.33
LSM1-201ENST00000311351 SLC35F5Q8WV83 523 aa17.09■□□□□ 0.33
LSM1-201ENST00000311351 KCTD13Q8WZ19 329 aa17.09■□□□□ 0.33
LSM1-201ENST00000311351 EDEM1Q92611 657 aa17.09■□□□□ 0.33
LSM1-201ENST00000311351 P2RY11Q96G91 374 aa17.09■□□□□ 0.33
LSM1-201ENST00000311351 GBP4Q96PP9 640 aa17.09■□□□□ 0.33
LSM1-201ENST00000311351 BBS2Q9BXC9 721 aa17.09■□□□□ 0.33
LSM1-201ENST00000311351 THAP9Q9H5L6 903 aa17.09■□□□□ 0.33
LSM1-201ENST00000311351 ACP6Q9NPH0 428 aa17.09■□□□□ 0.33
LSM1-201ENST00000311351 AJAP1Q9UKB5 411 aaPredicted RBP17.09■□□□□ 0.33
LSM1-201ENST00000311351 CNTN6Q9UQ52 1028 aa17.09■□□□□ 0.33
LSM1-201ENST00000311351 SLC12A8A0AV02 714 aa17.08■□□□□ 0.32
LSM1-201ENST00000311351 TYRP14679 529 aa17.08■□□□□ 0.32
LSM1-201ENST00000311351 ERCC5P28715 1186 aaPredicted RBP17.08■□□□□ 0.32
LSM1-201ENST00000311351 CORO1AP31146 461 aaKnown RBP17.08■□□□□ 0.32
LSM1-201ENST00000311351 TIE1P35590 1138 aa17.08■□□□□ 0.32
LSM1-201ENST00000311351 GRIA2P42262 883 aa17.08■□□□□ 0.32
LSM1-201ENST00000311351 DAOAP59103 153 aa17.08■□□□□ 0.32
LSM1-201ENST00000311351 SIM2Q14190 667 aaPredicted RBP17.08■□□□□ 0.32
LSM1-201ENST00000311351 STILQ15468 1287 aa17.08■□□□□ 0.32
LSM1-201ENST00000311351 ARHGAP44Q17R89 818 aa17.08■□□□□ 0.32
LSM1-201ENST00000311351 EXOC3L4Q17RC7 722 aa17.08■□□□□ 0.32
LSM1-201ENST00000311351 EMC10Q5UCC4 262 aa17.08■□□□□ 0.32
LSM1-201ENST00000311351 ALLCQ8N6M5 410 aa17.08■□□□□ 0.32
LSM1-201ENST00000311351 CLEC4CQ8WTT0 213 aa17.08■□□□□ 0.32
LSM1-201ENST00000311351 CNGB3Q9NQW8 809 aa17.08■□□□□ 0.32
LSM1-201ENST00000311351 DNAJC17Q9NVM6 304 aaKnown RBP17.08■□□□□ 0.32
LSM1-201ENST00000311351 MARK1Q9P0L2 795 aa17.08■□□□□ 0.32
LSM1-201ENST00000311351 DEC1Q9P2X7 70 aa17.08■□□□□ 0.32
LSM1-201ENST00000311351 APEX2Q9UBZ4 518 aa17.08■□□□□ 0.32
LSM1-201ENST00000311351 DACH1Q9UI36 760 aa17.08■□□□□ 0.32
LSM1-201ENST00000311351 STRIP2Q9ULQ0 834 aa17.08■□□□□ 0.32
LSM1-201ENST00000311351 BECN2A8MW95 431 aa17.07■□□□□ 0.32
LSM1-201ENST00000311351 LETM1O95202 739 aaPredicted RBP17.07■□□□□ 0.32
LSM1-201ENST00000311351 KLF8O95600 359 aaPredicted RBP17.07■□□□□ 0.32
LSM1-201ENST00000311351 HNRNPLP14866 589 aaKnown RBP eCLIP17.07■□□□□ 0.323e-7■□□□□ 9.9
LSM1-201ENST00000311351 PON1P27169 355 aa17.07■□□□□ 0.32
LSM1-201ENST00000311351 KIR2DL1P43626 348 aaPredicted RBP17.07■□□□□ 0.32
LSM1-201ENST00000311351 COG7P83436 770 aa17.07■□□□□ 0.32
LSM1-201ENST00000311351 MAN2A1Q16706 1144 aa17.07■□□□□ 0.32
LSM1-201ENST00000311351 C10orf76Q5T2E6 689 aa17.07■□□□□ 0.32
LSM1-201ENST00000311351 BSPRYQ5W0U4 402 aa17.07■□□□□ 0.32
LSM1-201ENST00000311351 DENND1BQ6P3S1 775 aa17.07■□□□□ 0.32
LSM1-201ENST00000311351 CEP68Q76N32 757 aa17.07■□□□□ 0.32
LSM1-201ENST00000311351 FAM114A1Q8IWE2 563 aa17.07■□□□□ 0.32
LSM1-201ENST00000311351 TERB1Q8NA31 727 aa17.07■□□□□ 0.32
LSM1-201ENST00000311351 IL17RCQ8NAC3 791 aa17.07■□□□□ 0.32
LSM1-201ENST00000311351 SIX2Q9NPC8 291 aa17.07■□□□□ 0.32
LSM1-201ENST00000311351 PLK2Q9NYY3 685 aa17.07■□□□□ 0.32
LSM1-201ENST00000311351 SFMBT1Q9UHJ3 866 aa17.07■□□□□ 0.32
LSM1-201ENST00000311351 RAB23Q9ULC3 237 aa17.07■□□□□ 0.32
LSM1-201ENST00000311351 MMP17Q9ULZ9 603 aa17.07■□□□□ 0.32
LSM1-201ENST00000311351 RALGAPA1Q6GYQ0 2036 aa17.07■□□□□ 0.32
LSM1-201ENST00000311351 GTPBP10A4D1E9 387 aaKnown RBP17.06■□□□□ 0.32
LSM1-201ENST00000311351 SGK1O00141 431 aa17.06■□□□□ 0.32
LSM1-201ENST00000311351 AXIN1O15169 862 aa17.06■□□□□ 0.32
LSM1-201ENST00000311351 MSI1O43347 362 aaKnown RBP17.06■□□□□ 0.32
LSM1-201ENST00000311351 THAP12O43422 761 aa17.06■□□□□ 0.32
LSM1-201ENST00000311351 CACNG3O60359 315 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms