RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 INTS2Q9H0H0 1204 aaKnown RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 CYP4F11Q9HBI6 524 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ZC3H7BQ9UGR2 993 aaKnown RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 TBK1Q9UHD2 729 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 PCDHGB3Q9Y5G1 929 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 GRIN2DO15399 1336 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 WWP2O00308 870 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 TBC1D4O60343 1298 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 ATG13O75143 517 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 PGK2P07205 417 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CHRM3P20309 590 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 MSH3P20585 1137 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CRABP2P29373 138 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 EEF1DP29692 281 aaKnown RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 BCL2L1Q07817 233 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 RFTN2Q52LD8 501 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 TMEM164Q5U3C3 297 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 RASGRP2Q7LDG7 609 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 TBC1D10CQ8IV04 446 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 KCTD13Q8WZ19 329 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 C19orf60Q96EN9 201 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 ZNF333Q96JL9 665 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CIPCQ9C0C6 399 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 SCN3BQ9NY72 215 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CTNNAL1Q9UBT7 734 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CDH9Q9ULB4 789 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 NEU2Q9Y3R4 380 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 ATXN2Q99700 1313 aaKnown RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CYP2D7A0A087X1C5 515 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 SDR42E2A6NKP2 422 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 TLL1O43897 1013 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 PQBP1O60828 265 aaKnown RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 GLP2RO95838 553 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CTSHP09668 335 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 MBL2P11226 248 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 HOXC8P31273 242 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 SLC20A2Q08357 652 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 PDIA2Q13087 525 aaKnown RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 RBBP7Q16576 425 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 PRAMEF18Q5VWM3 479 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 ZNF720Q7Z2F6 126 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 RASSF3Q86WH2 238 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 DDIASQ8IXT1 998 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 ULK2Q8IYT8 1036 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 ZBED8Q8IZ13 594 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 SPPL2BQ8TCT7 592 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 SAAL1Q96ER3 474 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 SERAC1Q96JX3 654 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CCT7Q99832 543 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 ECSITQ9BQ95 431 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 PACSIN1Q9BY11 444 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 ASCC2Q9H1I8 757 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 SYNDIG1Q9H7V2 258 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 HCN3Q9P1Z3 774 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 TRAF3IP3Q9Y228 551 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 ANKRD6Q9Y2G4 727 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 MRPS23Q9Y3D9 190 aaKnown RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 ASB3Q9Y575 518 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 SYNDIG1LA6NDD5 238 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 TEX28O15482 410 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 DIAPH2O60879 1101 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 GADD45BO75293 160 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 COX7A2P14406 83 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 MAP2K2P36507 400 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 PEX5P50542 639 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 KCNK10P57789 538 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 LAMTOR4Q0VGL1 99 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CDH17Q12864 832 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 GRIK3Q13003 919 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 TOB2Q14106 344 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 KIZQ2M2Z5 673 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CCDC153Q494R4 210 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 PPM1NQ8N819 430 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 TCF25Q9BQ70 676 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 ATP13A3Q9H7F0 1226 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 C20orf96Q9NUD7 363 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 SPTLC3Q9NUV7 552 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 PCDHB9Q9Y5E1 797 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 RAD51BO15315 384 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 INPP4BO15327 924 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CYP3A4P08684 503 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 DPP6P42658 865 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 PLA2G4AP47712 749 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 IL1RL1Q01638 556 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 RAB30Q15771 203 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 HLA-DQA1Q5Y7H0 255 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 DCLRE1AQ6PJP8 1040 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 LVRNQ6Q4G3 990 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CYB5R4Q7L1T6 521 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 KRT73Q86Y46 540 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 PSTKQ8IV42 348 aaKnown RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 EIF1ADQ8N9N8 165 aaKnown RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CASKIN2Q8WXE0 1202 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 TMEM143Q96AN5 459 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 IL17RAQ96F46 866 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 DNAJC1Q96KC8 554 aaKnown RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 YIPF2Q9BWQ6 316 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 RETREG1Q9H6L5 497 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 NR2E1Q9Y466 385 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms