RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 ADCY3O60266 1144 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 USP12O75317 370 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 TRUB2O95900 331 aaKnown RBP15.34■□□□□ 0.05
RUNX3-201ENST00000308873 GPD1P21695 349 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 OCRLQ01968 901 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 PTPN11Q06124 597 aaPredicted RBP15.34■□□□□ 0.05
RUNX3-201ENST00000308873 CDC16Q13042 620 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 USP4Q13107 963 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 ITGA9Q13797 1035 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 LBRQ14739 615 aaKnown RBP15.34■□□□□ 0.05
RUNX3-201ENST00000308873 TRMT5Q32P41 509 aaKnown RBP15.34■□□□□ 0.05
RUNX3-201ENST00000308873 PPP1R2P3Q6NXS1 205 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 UNC5AQ6ZN44 842 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 CENPKQ9BS16 269 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 KCNK4Q9NYG8 393 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 MRPL42Q9Y6G3 142 aaKnown RBP15.34■□□□□ 0.05
RUNX3-201ENST00000308873 OGTO15294 1046 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 TCF7P36402 384 aaPredicted RBP15.34■□□□□ 0.05
RUNX3-201ENST00000308873 COPAP53621 1224 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 LY6KQ17RY6 165 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 EFHC1Q5JVL4 640 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 WDR49Q8IV35 697 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 FAM172AQ8WUF8 416 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 B3GNT5Q9BYG0 378 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 WDR35Q9P2L0 1181 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 SOX13Q9UN79 622 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 NFICP08651 508 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 DESP17661 470 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 PEX2P28328 305 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 SDC4P31431 198 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 RAB27AP51159 221 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 SLC18A1P54219 525 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 CA9Q16790 459 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 IYDQ6PHW0 289 aa15.34■□□□□ 0.05
RUNX3-201ENST00000308873 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.34■□□□□ 0.05
RUNX3-201ENST00000308873 MYH9P35579 1960 aaKnown RBP15.33■□□□□ 0.05
RUNX3-201ENST00000308873 GOLGA8TH3BQL2 631 aa15.33■□□□□ 0.05
RUNX3-201ENST00000308873 APOEP02649 317 aa15.33■□□□□ 0.05
RUNX3-201ENST00000308873 ETV4P43268 484 aa15.33■□□□□ 0.05
RUNX3-201ENST00000308873 OR52E8Q6IFG1 317 aa15.33■□□□□ 0.05
RUNX3-201ENST00000308873 SESTD1Q86VW0 696 aa15.33■□□□□ 0.05
RUNX3-201ENST00000308873 XYLT1Q86Y38 959 aa15.33■□□□□ 0.05
RUNX3-201ENST00000308873 GALNT15Q8N3T1 639 aa15.33■□□□□ 0.05
RUNX3-201ENST00000308873 ZNF276Q8N554 614 aa15.33■□□□□ 0.05
RUNX3-201ENST00000308873 GDPD5Q8WTR4 605 aa15.33■□□□□ 0.05
RUNX3-201ENST00000308873 ACAD9Q9H845 621 aa15.33■□□□□ 0.05
RUNX3-201ENST00000308873 TM7SF2O76062 418 aa15.33■□□□□ 0.04
RUNX3-201ENST00000308873 HSPA4LO95757 839 aa15.33■□□□□ 0.04
RUNX3-201ENST00000308873 RAG1P15918 1043 aa15.33■□□□□ 0.04
RUNX3-201ENST00000308873 GBE1Q04446 702 aa15.33■□□□□ 0.04
RUNX3-201ENST00000308873 FOXB2Q5VYV0 432 aa15.33■□□□□ 0.04
RUNX3-201ENST00000308873 ETNK2Q9NVF9 386 aa15.33■□□□□ 0.04
RUNX3-201ENST00000308873 APPL1Q9UKG1 709 aa15.33■□□□□ 0.04
RUNX3-201ENST00000308873 HBS1LQ9Y450 684 aaKnown RBP15.33■□□□□ 0.04
RUNX3-201ENST00000308873 TEX264Q9Y6I9 313 aa15.33■□□□□ 0.04
RUNX3-201ENST00000308873 A8MXQ7 604 aa15.33■□□□□ 0.04
RUNX3-201ENST00000308873 ATF7IP2Q5U623 682 aa15.33■□□□□ 0.04
RUNX3-201ENST00000308873 HEATR6Q6AI08 1181 aaKnown RBP15.33■□□□□ 0.04
RUNX3-201ENST00000308873 DPY19L2Q6NUT2 758 aa15.33■□□□□ 0.04
RUNX3-201ENST00000308873 CMC1Q7Z7K0 106 aa15.33■□□□□ 0.04
RUNX3-201ENST00000308873 MFN1Q8IWA4 741 aa15.33■□□□□ 0.04
RUNX3-201ENST00000308873 ADAM32Q8TC27 787 aa15.33■□□□□ 0.04
RUNX3-201ENST00000308873 CPB2Q96IY4 423 aa15.33■□□□□ 0.04
RUNX3-201ENST00000308873 MYOZ2Q9NPC6 264 aa15.33■□□□□ 0.04
RUNX3-201ENST00000308873 DDX18Q9NVP1 670 aaKnown RBP15.33■□□□□ 0.04
RUNX3-201ENST00000308873 PDP2Q9P2J9 529 aa15.33■□□□□ 0.04
RUNX3-201ENST00000308873 RNASEH1O60930 286 aaKnown RBP15.32■□□□□ 0.04
RUNX3-201ENST00000308873 METTL18O95568 372 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 LCP1P13796 627 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 MLH1P40692 756 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 CCNFP41002 786 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 SLC1A6P48664 564 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 AQP4P55087 323 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 MRPS5P82675 430 aaKnown RBP15.32■□□□□ 0.04
RUNX3-201ENST00000308873 DEUP1Q05D60 604 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 LAMTOR4Q0VGL1 99 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 TMEM132BQ14DG7 1078 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 LRRC23Q53EV4 343 aaPredicted RBP15.32■□□□□ 0.04
RUNX3-201ENST00000308873 MZB1Q8WU39 189 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 PPP1R13LQ8WUF5 828 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 USP13Q92995 863 aaPredicted RBP15.32■□□□□ 0.04
RUNX3-201ENST00000308873 PLA2G4CQ9UP65 541 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 TPP1O14773 563 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 CREB3O43889 395 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 GSTA2P09210 222 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 PGGT1BP53609 377 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 CXCL9Q07325 125 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 IL31Q6EBC2 164 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 SPATA24Q86W54 205 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 DNAAF3Q8N9W5 541 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 FAM136AQ96C01 138 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 APOL2Q9BQE5 337 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 LPIN3Q9BQK8 851 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 ZNF518BQ9C0D4 1074 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 BTBD7Q9P203 1132 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 KCNG1Q9UIX4 513 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 C3orf70A6NLC5 250 aaPredicted RBP15.32■□□□□ 0.04
RUNX3-201ENST00000308873 OR6B1O95007 311 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 ACOT1Q86TX2 421 aa15.32■□□□□ 0.04
RUNX3-201ENST00000308873 CDKL2Q92772 493 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms