RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 GOLGA8KD6RF30 607 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 NRP1O14786 923 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 POLR3GO15318 223 aaPredicted RBP12.37□□□□□ -0.43
TRIM40-205ENST00000307859 PQBP1O60828 265 aaKnown RBP12.37□□□□□ -0.43
TRIM40-205ENST00000307859 RNF40O75150 1001 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 PARNO95453 639 aaKnown RBP12.37□□□□□ -0.43
TRIM40-205ENST00000307859 CXCL10P02778 98 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 FYNP06241 537 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 PECAM1P16284 738 aaPredicted RBP12.37□□□□□ -0.43
TRIM40-205ENST00000307859 ADCY8P40145 1251 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 SULT1E1P49888 294 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 ITGA8P53708 1063 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 PMS2P54278 862 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 TSPY1Q01534 308 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 RNASELQ05823 741 aaKnown RBP12.37□□□□□ -0.43
TRIM40-205ENST00000307859 NOMO1Q15155 1222 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 TRIP13Q15645 432 aaPredicted RBP12.37□□□□□ -0.43
TRIM40-205ENST00000307859 CA9Q16790 459 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 TCTN1Q2MV58 587 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 SLC9A4Q6AI14 798 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 BHLHA9Q7RTU4 235 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 GSTA5Q7RTV2 222 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 LRRTM3Q86VH5 581 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 PSTKQ8IV42 348 aaKnown RBP12.37□□□□□ -0.43
TRIM40-205ENST00000307859 UBLCP1Q8WVY7 318 aaPredicted RBP12.37□□□□□ -0.43
TRIM40-205ENST00000307859 IRGQQ8WZA9 623 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 ZBTB9Q96C00 473 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 CASD1Q96PB1 797 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 TMEM209Q96SK2 561 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 UHRF1Q96T88 793 aaPredicted RBP12.37□□□□□ -0.43
TRIM40-205ENST00000307859 EPB41L4BQ9H329 900 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 POPDC2Q9HBU9 364 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 PCDH9Q9HC56 1237 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 DMAP1Q9NPF5 467 aaPredicted RBP12.37□□□□□ -0.43
TRIM40-205ENST00000307859 CALCOCO1Q9P1Z2 691 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 DNAJB4Q9UDY4 337 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 STAP1Q9ULZ2 295 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 ATP8A1Q9Y2Q0 1164 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 PCDHB7Q9Y5E2 793 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 OAZ2O95190 189 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 TGM2P21980 687 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 BDNFP23560 247 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 L1CAMP32004 1257 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 OR1G1P47890 313 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 ATXN1P54253 815 aaKnown RBP12.37□□□□□ -0.43
TRIM40-205ENST00000307859 SLMAPQ14BN4 828 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 ANKRD20A8PQ5CZ79 823 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 C9orf50Q5SZB4 431 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 SLC39A5Q6ZMH5 540 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 HFE2Q6ZVN8 426 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 ABI1Q8IZP0 508 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 PQLC3Q8N755 202 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 GLIS1Q8NBF1 620 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 TOX2Q96NM4 488 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 FAM193BQ96PV7 902 aaPredicted RBP12.37□□□□□ -0.43
TRIM40-205ENST00000307859 MAK16Q9BXY0 300 aaKnown RBP12.37□□□□□ -0.43
TRIM40-205ENST00000307859 RHOBTB2Q9BYZ6 727 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 TSPYL1Q9H0U9 437 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 PABPC3Q9H361 631 aaKnown RBP12.37□□□□□ -0.43
TRIM40-205ENST00000307859 NRDE2Q9H7Z3 1164 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 AAASQ9NRG9 546 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 VPS18Q9P253 973 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 THEGQ9P2T0 379 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 SAE1Q9UBE0 346 aaPredicted RBP12.37□□□□□ -0.43
TRIM40-205ENST00000307859 AP4E1Q9UPM8 1137 aa12.37□□□□□ -0.43
TRIM40-205ENST00000307859 COL4A6Q14031 1691 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 YJEFN3A6XGL0 299 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 E7ENQ6 273 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 DNALI1O14645 258 aaPredicted RBP12.36□□□□□ -0.43
TRIM40-205ENST00000307859 SYN3O14994 580 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 MCF2LO15068 1137 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 HOXA2O43364 376 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 TRAPPC3O43617 180 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 ZBED1O96006 694 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 NUDT17P0C025 328 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 RARGP13631 454 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 RDXP35241 583 aaKnown RBP12.36□□□□□ -0.43
TRIM40-205ENST00000307859 VPS41P49754 854 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 RABGGTBP53611 331 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 PITX1P78337 314 aaPredicted RBP12.36□□□□□ -0.43
TRIM40-205ENST00000307859 FAAP100Q0VG06 881 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 DCAF6Q58WW2 860 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 C1orf53Q5VUE5 145 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 SYPL2Q5VXT5 272 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 IZUMO3Q5VZ72 239 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 PM20D1Q6GTS8 502 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 HIBCHQ6NVY1 386 aaPredicted RBP12.36□□□□□ -0.43
TRIM40-205ENST00000307859 C4orf50Q6ZRC1 276 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 CCDC185Q8N715 623 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 PLD5Q8N7P1 536 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 PCDH19Q8TAB3 1148 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 PGAP3Q96FM1 320 aaPredicted RBP12.36□□□□□ -0.43
TRIM40-205ENST00000307859 PKNOX2Q96KN3 472 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 TMEM121Q9BTD3 319 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 ZCWPW1Q9H0M4 648 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 ADAM7Q9H2U9 754 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 HIPK3Q9H422 1215 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 RRN3Q9NYV6 651 aa12.36□□□□□ -0.43
TRIM40-205ENST00000307859 RCOR3Q9P2K3 495 aaPredicted RBP12.36□□□□□ -0.43
TRIM40-205ENST00000307859 ANAPC5Q9UJX4 755 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms