RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 CCNYQ8ND76 341 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 CD101Q93033 1021 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 MKL1Q969V6 931 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 C18orf25Q96B23 403 aaPredicted RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 DYDC2Q96IM9 177 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 SERPINB11Q96P15 392 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 KCNN2Q9H2S1 579 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 MRM3Q9HC36 420 aaKnown RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 PIM2Q9P1W9 311 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 TTC26A0AVF1 554 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 FAUP35544 74 aaKnown RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 ACTRT2Q8TDY3 377 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 MRI1Q9BV20 369 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 ABCB6Q9NP58 842 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 PDHBP11177 359 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 SLC9A1P19634 815 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 CYP2J2P51589 502 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 ARSEP51690 589 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 CDH17Q12864 832 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 SNAPC2Q13487 334 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 INTS6LQ5JSJ4 861 aaKnown RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 CCDC36Q8IYA8 594 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 PDCD6IPQ8WUM4 868 aaKnown RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 PTGER2P43116 358 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 PTH1RQ03431 593 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 RRP1BQ14684 758 aaKnown RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 COLGALT2Q8IYK4 626 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 KATNAL2Q8IYT4 538 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 HSFY1Q96LI6 401 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 YTHDF1Q9BYJ9 559 aaKnown RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 TAS2R13Q9NYV9 303 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 C2CD2Q9Y426 696 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 RPTORQ8N122 1335 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 TXNDC9O14530 226 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 FTLP02792 175 aaPredicted RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 CHRNB3Q05901 458 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 TROAPQ12815 778 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 DPYSQ14117 519 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 FAM98BQ52LJ0 330 aaKnown RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 PDPK2PQ6A1A2 396 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 SLC35G2Q8TBE7 412 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 H2AFY2Q9P0M6 372 aaPredicted RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 RAB26Q9ULW5 256 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 USP1O94782 785 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 RAG1P15918 1043 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ALG11Q2TAA5 492 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 FBXO43Q4G163 708 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ATPAF2Q8N5M1 289 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 HAVCR1Q96D42 359 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 C19orf43Q9BQ61 176 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 SLC25A23Q9BV35 468 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 COMMD8Q9NX08 183 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 RPS6KA6Q9UK32 745 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 CCDC162PA2VCL2 907 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ZNF862O60290 1169 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 NFASCO94856 1347 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ITIH1P19827 911 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 GUCY2FP51841 1108 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 NCOA4Q13772 614 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ZC3HC1Q86WB0 502 aaKnown RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 EID3Q8N140 333 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 USHBP1Q8N6Y0 703 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 MED10Q9BTT4 135 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ZC3H7BQ9UGR2 993 aaKnown RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 METTL21EPA6NDL7 271 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 TLR2O60603 784 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 KRT34O76011 436 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 VNN2O95498 520 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 PAGE2Q7Z2X7 111 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 NSUN4Q96CB9 384 aaKnown RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 TUBGCP5Q96RT8 1024 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ZSWIM1Q9BR11 485 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 NLNQ9BYT8 704 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 CLEC4MQ9H2X3 399 aaPredicted RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 PAPOLBQ9NRJ5 636 aaKnown RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 HPS5Q9UPZ3 1129 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 PFKLP17858 780 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 GTF2IP78347 998 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 IL18R1Q13478 541 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ZNF568Q3ZCX4 644 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ZDHHC13Q8IUH4 622 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 C1orf21Q9H246 121 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 SP110Q9HB58 689 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 PDGFCQ9NRA1 345 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 CRNNQ9UBG3 495 aaPredicted RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 ATP11BQ9Y2G3 1177 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 MAGED1Q9Y5V3 778 aaPredicted RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 DOCK2Q92608 1830 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 SPDYE5A6NIY4 337 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 AGR2O95994 175 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 MSH3P20585 1137 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 SLC11A2P49281 568 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 CDH6P55285 790 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 SLC12A1Q13621 1099 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 HERC6Q8IVU3 1022 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 MOSPD2Q8NHP6 518 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 STON2Q8WXE9 905 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 GINS4Q9BRT9 223 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 LHX5Q9H2C1 402 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms