RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 PTCD3Q96EY7 689 aaKnown RBP15.7■□□□□ 0.1
CSDC2-201ENST00000306149 DCLRE1BQ9H816 532 aa15.7■□□□□ 0.1
CSDC2-201ENST00000306149 POPDC2Q9HBU9 364 aa15.7■□□□□ 0.1
CSDC2-201ENST00000306149 PIH1D1Q9NWS0 290 aaKnown RBP15.7■□□□□ 0.1
CSDC2-201ENST00000306149 PAK5Q9P286 719 aa15.7■□□□□ 0.1
CSDC2-201ENST00000306149 MARCOQ9UEW3 520 aaPredicted RBP15.7■□□□□ 0.1
CSDC2-201ENST00000306149 NME7Q9Y5B8 376 aa15.7■□□□□ 0.1
CSDC2-201ENST00000306149 CCDC22O60826 627 aa15.7■□□□□ 0.1
CSDC2-201ENST00000306149 TGDSO95455 350 aa15.7■□□□□ 0.1
CSDC2-201ENST00000306149 IL1BP01584 269 aa15.7■□□□□ 0.1
CSDC2-201ENST00000306149 KITP10721 976 aa15.7■□□□□ 0.1
CSDC2-201ENST00000306149 ATP6V1C1P21283 382 aa15.7■□□□□ 0.1
CSDC2-201ENST00000306149 OSBPP22059 807 aa15.7■□□□□ 0.1
CSDC2-201ENST00000306149 ATICP31939 592 aa15.7■□□□□ 0.1
CSDC2-201ENST00000306149 SESN3P58005 492 aa15.7■□□□□ 0.1
CSDC2-201ENST00000306149 TMEM62Q0P6H9 643 aa15.7■□□□□ 0.1
CSDC2-201ENST00000306149 OLFML1Q6UWY5 402 aa15.7■□□□□ 0.1
CSDC2-201ENST00000306149 ALYREFQ86V81 257 aaKnown RBP15.7■□□□□ 0.1
CSDC2-201ENST00000306149 C7orf31Q8N865 590 aa15.7■□□□□ 0.1
CSDC2-201ENST00000306149 SPDL1Q96EA4 605 aa15.7■□□□□ 0.1
CSDC2-201ENST00000306149 ASB7Q9H672 318 aa15.7■□□□□ 0.1
CSDC2-201ENST00000306149 CSH1P0DML2 217 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 CSH2P0DML3 217 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 SDC4P31431 198 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 IRX4P78413 519 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 SLC10A2Q12908 348 aaPredicted RBP15.69■□□□□ 0.1
CSDC2-201ENST00000306149 KHDC1Q4VXA5 237 aaKnown RBP15.69■□□□□ 0.1
CSDC2-201ENST00000306149 MDH1BQ5I0G3 518 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 MROH9Q5TGP6 573 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 C4orf50Q6ZRC1 276 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 UNC5BQ8IZJ1 945 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 MICAL1Q8TDZ2 1067 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 SKA1Q96BD8 255 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 ACAP3Q96P50 834 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 MPHOSPH6Q99547 160 aaKnown RBP15.69■□□□□ 0.1
CSDC2-201ENST00000306149 CNTN3Q9P232 1028 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 MFHAS1Q9Y4C4 1052 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.69■□□□□ 0.1
CSDC2-201ENST00000306149 A6NHS1 94 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 PAPSS1O43252 624 aaPredicted RBP15.69■□□□□ 0.1
CSDC2-201ENST00000306149 DDNO94850 711 aaPredicted RBP15.69■□□□□ 0.1
CSDC2-201ENST00000306149 UPP2O95045 317 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 LGALS2P05162 132 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 ACADSP16219 412 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 PTDSS1P48651 473 aaKnown RBP15.69■□□□□ 0.1
CSDC2-201ENST00000306149 RBP5P82980 135 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 TNFAIP2Q03169 654 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 INCA1Q0VD86 236 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 TTLL4Q14679 1199 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 GLRA4Q5JXX5 417 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 TTC39BQ5VTQ0 682 aaPredicted RBP15.69■□□□□ 0.1
CSDC2-201ENST00000306149 RINLQ6ZS11 566 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 RFX8Q6ZV50 586 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 APBB1IPQ7Z5R6 666 aaPredicted RBP15.69■□□□□ 0.1
CSDC2-201ENST00000306149 BTBD10Q9BSF8 475 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 HES2Q9Y543 173 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 PPP2R3BQ9Y5P8 575 aa15.69■□□□□ 0.1
CSDC2-201ENST00000306149 BRCA1P38398 1863 aaKnown RBP15.68■□□□□ 0.1
CSDC2-201ENST00000306149 DNAJC25-GNG10A0A024R161 153 aa15.68■□□□□ 0.1
CSDC2-201ENST00000306149 A0A0G2JLL6 359 aaPredicted RBP15.68■□□□□ 0.1
CSDC2-201ENST00000306149 SLC15A5A6NIM6 579 aa15.68■□□□□ 0.1
CSDC2-201ENST00000306149 SLC26A2P50443 739 aa15.68■□□□□ 0.1
CSDC2-201ENST00000306149 ERFP50548 548 aa15.68■□□□□ 0.1
CSDC2-201ENST00000306149 HDAC4P56524 1084 aa15.68■□□□□ 0.1
CSDC2-201ENST00000306149 MRPS5P82675 430 aaKnown RBP15.68■□□□□ 0.1
CSDC2-201ENST00000306149 CDK16Q00536 496 aa15.68■□□□□ 0.1
CSDC2-201ENST00000306149 BOLA3Q53S33 107 aa15.68■□□□□ 0.1
CSDC2-201ENST00000306149 UNC5AQ6ZN44 842 aa15.68■□□□□ 0.1
CSDC2-201ENST00000306149 PRRT2Q7Z6L0 340 aaPredicted RBP15.68■□□□□ 0.1
CSDC2-201ENST00000306149 NLGN2Q8NFZ4 835 aa15.68■□□□□ 0.1
CSDC2-201ENST00000306149 OSBPL1AQ9BXW6 950 aa15.68■□□□□ 0.1
CSDC2-201ENST00000306149 KLC2Q9H0B6 622 aa15.68■□□□□ 0.1
CSDC2-201ENST00000306149 DHX35Q9H5Z1 703 aaKnown RBP15.68■□□□□ 0.1
CSDC2-201ENST00000306149 VRTNQ9H8Y1 702 aa15.68■□□□□ 0.1
CSDC2-201ENST00000306149 SLC17A6Q9P2U8 582 aa15.68■□□□□ 0.1
CSDC2-201ENST00000306149 MTO1Q9Y2Z2 717 aaKnown RBP15.68■□□□□ 0.1
CSDC2-201ENST00000306149 GYG2O15488 501 aa15.68■□□□□ 0.1
CSDC2-201ENST00000306149 SNRPAP09012 282 aaKnown RBP15.68■□□□□ 0.1
CSDC2-201ENST00000306149 CRADDP78560 199 aa15.68■□□□□ 0.1
CSDC2-201ENST00000306149 NSL1Q96IY1 281 aa15.68■□□□□ 0.1
CSDC2-201ENST00000306149 NMUR2Q9GZQ4 415 aa15.68■□□□□ 0.1
CSDC2-201ENST00000306149 DPEP3Q9H4B8 488 aa15.68■□□□□ 0.1
CSDC2-201ENST00000306149 PCMTD2Q9NV79 361 aa15.68■□□□□ 0.1
CSDC2-201ENST00000306149 ZFATQ9P243 1243 aa15.68■□□□□ 0.1
CSDC2-201ENST00000306149 LTBP3Q9NS15 1303 aa15.67■□□□□ 0.1
CSDC2-201ENST00000306149 A0A0G2JMZ2 1700 aa15.67■□□□□ 0.1
CSDC2-201ENST00000306149 LRRC37A2A6NM11 1700 aa15.67■□□□□ 0.1
CSDC2-201ENST00000306149 SPAG6O75602 509 aa15.67■□□□□ 0.1
CSDC2-201ENST00000306149 RFPL1O75677 317 aa15.67■□□□□ 0.1
CSDC2-201ENST00000306149 SLC25A27O95847 323 aa15.67■□□□□ 0.1
CSDC2-201ENST00000306149 CYP2F1P24903 491 aa15.67■□□□□ 0.1
CSDC2-201ENST00000306149 GCKP35557 465 aa15.67■□□□□ 0.1
CSDC2-201ENST00000306149 TMPRSS15P98073 1019 aa15.67■□□□□ 0.1
CSDC2-201ENST00000306149 ARHGAP1Q07960 439 aa15.67■□□□□ 0.1
CSDC2-201ENST00000306149 BST1Q10588 318 aa15.67■□□□□ 0.1
CSDC2-201ENST00000306149 TSNAXIP1Q2TAA8 658 aa15.67■□□□□ 0.1
CSDC2-201ENST00000306149 AFG1LQ8WV93 481 aa15.67■□□□□ 0.1
CSDC2-201ENST00000306149 ZMAT2Q96NC0 199 aaKnown RBP15.67■□□□□ 0.1
CSDC2-201ENST00000306149 CITO14578 2027 aa15.67■□□□□ 0.1
CSDC2-201ENST00000306149 FCHO1O14526 889 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms