RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 C4orf22Q6V702 233 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 TMPRSS6Q8IU80 811 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 PPIL6Q8IXY8 311 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 ZNF280CQ8ND82 737 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 GAB3Q8WWW8 586 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 ZNF606Q8WXB4 792 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 SLC7A3Q8WY07 619 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 SLCO4A1Q96BD0 722 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 UHRF1Q96T88 793 aaPredicted RBP5.66□□□□□ -1.5
VPS50-202ENST00000305866 RPAP3Q9H6T3 665 aaPredicted RBP5.66□□□□□ -1.5
VPS50-202ENST00000305866 PRR5-ARHGAP8B1AHC4 643 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 FAM155AB1AL88 458 aaPredicted RBP5.66□□□□□ -1.5
VPS50-202ENST00000305866 KBTBD13C9JR72 458 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 H0Y3Z8 333 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 NFKBIEO00221 500 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 AVILO75366 819 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 GAS8O95995 478 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 NEFHP12036 1026 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 KDELR1P24390 212 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 CRHR1P34998 444 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 PEX19P40855 299 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 SERPINB4P48594 390 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 ARHGAP8P85298 464 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 BST1Q10588 318 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 CALCOCO2Q13137 446 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 DPYSL3Q14195 570 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 RCN2Q14257 317 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 NOMO1Q15155 1222 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 KBTBD12Q3ZCT8 623 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 RALGPS1Q5JS13 557 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 HP1BP3Q5SSJ5 553 aaPredicted RBP5.66□□□□□ -1.5
VPS50-202ENST00000305866 FAM43BQ6ZT52 329 aaPredicted RBP5.66□□□□□ -1.5
VPS50-202ENST00000305866 XYLT1Q86Y38 959 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 NUP93Q8N1F7 819 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 MPP5Q8N3R9 675 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.66□□□□□ -1.5
VPS50-202ENST00000305866 LRRC8CQ8TDW0 803 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 CENPIQ92674 756 aaPredicted RBP5.66□□□□□ -1.5
VPS50-202ENST00000305866 KLRG1Q96E93 195 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 PIWIL1Q96J94 861 aaKnown RBP5.66□□□□□ -1.5
VPS50-202ENST00000305866 TSC22D3Q99576 134 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 NDNQ99608 321 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 CYP3A43Q9HB55 503 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 ETNK2Q9NVF9 386 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 RBAKQ9NYW8 714 aaPredicted RBP5.66□□□□□ -1.5
VPS50-202ENST00000305866 PDP2Q9P2J9 529 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 ASIC3Q9UHC3 531 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 SSX2IPQ9Y2D8 614 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 DERAQ9Y315 318 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 FRMPD3Q5JV73 1810 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 TMEM221A6NGB7 291 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 SPDYE16A6NNV3 312 aaPredicted RBP5.66□□□□□ -1.5
VPS50-202ENST00000305866 PI4K2BG5E9Z4 385 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 ZNF189O75820 626 aaPredicted RBP5.66□□□□□ -1.5
VPS50-202ENST00000305866 APBA3O96018 575 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 MYL2P10916 166 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 ZNF26P17031 533 aaPredicted RBP5.66□□□□□ -1.5
VPS50-202ENST00000305866 TCF7P36402 384 aaPredicted RBP5.66□□□□□ -1.5
VPS50-202ENST00000305866 DGKZQ13574 1117 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 AMHR2Q16671 573 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 LIN9Q5TKA1 542 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 OTUD1Q5VV17 481 aaPredicted RBP5.66□□□□□ -1.5
VPS50-202ENST00000305866 CCDC62Q6P9F0 684 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 CYHR1Q6ZMK1 362 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 SATL1Q86VE3 508 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 APOBEC3FQ8IUX4 373 aaKnown RBP5.66□□□□□ -1.5
VPS50-202ENST00000305866 ANKMY2Q8IV38 441 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 CHERPQ8IWX8 916 aaKnown RBP5.66□□□□□ -1.5
VPS50-202ENST00000305866 RBM12BQ8IXT5 1001 aaKnown RBP5.66□□□□□ -1.5
VPS50-202ENST00000305866 ZBED8Q8IZ13 594 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.66□□□□□ -1.5
VPS50-202ENST00000305866 ALKBH8Q96BT7 664 aaKnown RBP5.66□□□□□ -1.5
VPS50-202ENST00000305866 FAM167AQ96KS9 214 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 MMP19Q99542 508 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 DOK1Q99704 481 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 TEX13BQ9BXU2 312 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 INO80BQ9C086 356 aaPredicted RBP5.66□□□□□ -1.5
VPS50-202ENST00000305866 POLR3FQ9H1D9 316 aaPredicted RBP5.66□□□□□ -1.5
VPS50-202ENST00000305866 ACAD9Q9H845 621 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 KCNK9Q9NPC2 374 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 INIPQ9NRY2 104 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 C1orf112Q9NSG2 853 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 STOML1Q9UBI4 398 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 SH3BP1Q9Y3L3 701 aa5.66□□□□□ -1.5
VPS50-202ENST00000305866 H0Y858 1186 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 CHMP2AO43633 222 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 SPOPO43791 374 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 IL18RAPO95256 599 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 BPGMP07738 259 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 UQCRBP14927 111 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 XIAPP98170 497 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 WASHC5Q12768 1159 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 GPS1Q13098 491 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 THOC5Q13769 683 aaKnown RBP5.65□□□□□ -1.5
VPS50-202ENST00000305866 CAPSQ13938 189 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 UBAP2LQ14157 1087 aaKnown RBP5.65□□□□□ -1.5
VPS50-202ENST00000305866 MYLK3Q32MK0 819 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 GNPTABQ3T906 1256 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 SH3PXD2AQ5TCZ1 1133 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 IER5Q5VY09 327 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms