RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 FAM35AQ86V20 835 aa11.84□□□□□ -0.51
SCG2-201ENST00000305409 ZDHHC17Q8IUH5 632 aa11.84□□□□□ -0.51
SCG2-201ENST00000305409 HACE1Q8IYU2 909 aa11.84□□□□□ -0.51
SCG2-201ENST00000305409 GDAP1Q8TB36 358 aa11.84□□□□□ -0.51
SCG2-201ENST00000305409 FAF2Q96CS3 445 aa11.84□□□□□ -0.51
SCG2-201ENST00000305409 RTP3Q9BQQ7 232 aa11.84□□□□□ -0.51
SCG2-201ENST00000305409 TMEM109Q9BVC6 243 aa11.84□□□□□ -0.51
SCG2-201ENST00000305409 TSPYL1Q9H0U9 437 aa11.84□□□□□ -0.51
SCG2-201ENST00000305409 ANLNQ9NQW6 1124 aa11.84□□□□□ -0.51
SCG2-201ENST00000305409 CHST12Q9NRB3 414 aa11.84□□□□□ -0.51
SCG2-201ENST00000305409 CHMP2BQ9UQN3 213 aa11.84□□□□□ -0.51
SCG2-201ENST00000305409 GIT1Q9Y2X7 761 aa11.84□□□□□ -0.51
SCG2-201ENST00000305409 SNX10Q9Y5X0 201 aa11.84□□□□□ -0.51
SCG2-201ENST00000305409 CLUHO75153 1309 aa11.84□□□□□ -0.51
SCG2-201ENST00000305409 TMEM120BA0PK00 339 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 GMNCA6NCL1 334 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 TRAPPC3O43617 180 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 SPAG7O75391 227 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 ZBED1O96006 694 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 FYNP06241 537 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 OR4Q2P0C623 313 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 PTPN9P43378 593 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 ACADSBP45954 432 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 SNX16P57768 344 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 PDK2Q15119 407 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 RTN4RL1Q86UN2 441 aaPredicted RBP11.83□□□□□ -0.52
SCG2-201ENST00000305409 LRRTM3Q86VH5 581 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 SMC1BQ8NDV3 1235 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 FBXO36Q8NEA4 188 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 SLC7A14Q8TBB6 771 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 RAET1EQ8TD07 263 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 CENPIQ92674 756 aaPredicted RBP11.83□□□□□ -0.52
SCG2-201ENST00000305409 CSPG4P5Q96PW8 444 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 XPO6Q96QU8 1125 aaKnown RBP11.83□□□□□ -0.52
SCG2-201ENST00000305409 TRIM56Q9BRZ2 755 aaKnown RBP11.83□□□□□ -0.52
SCG2-201ENST00000305409 ROPN1BQ9BZX4 212 aaPredicted RBP11.83□□□□□ -0.52
SCG2-201ENST00000305409 ROPN1Q9HAT0 212 aaPredicted RBP11.83□□□□□ -0.52
SCG2-201ENST00000305409 PIGVQ9NUD9 493 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 INTS9Q9NV88 658 aaKnown RBP11.83□□□□□ -0.52
SCG2-201ENST00000305409 PIH1D1Q9NWS0 290 aaKnown RBP11.83□□□□□ -0.52
SCG2-201ENST00000305409 A0A0U1RQF3 1178 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 FAM72CH0Y354 149 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 CAPN9O14815 690 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 NOGQ13253 232 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 MBTPS1Q14703 1052 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 TNFAIP8L3Q5GJ75 292 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 EFHC1Q5JVL4 640 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 FAM72AQ5TYM5 149 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 FAM72DQ6L9T8 149 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 CD300LGQ6UXG3 332 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 FAM72BQ86X60 149 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 ZNF280BQ86YH2 543 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 PYROXD1Q8WU10 500 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 TEKT4Q8WW24 435 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 MYLPFQ96A32 169 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 SERPINB12Q96P63 405 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 LGMNQ99538 433 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 UBN1Q9NPG3 1134 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 SRRDQ9UH36 339 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 DDX20Q9UHI6 824 aaKnown RBP11.83□□□□□ -0.52
SCG2-201ENST00000305409 SHOC2Q9UQ13 582 aa11.83□□□□□ -0.52
SCG2-201ENST00000305409 I6L893 689 aaPredicted RBP11.82□□□□□ -0.52
SCG2-201ENST00000305409 MDM4O15151 490 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 ALOX15BO15296 676 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 DESP17661 470 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 RPL34P49207 117 aaKnown RBP11.82□□□□□ -0.52
SCG2-201ENST00000305409 SMAD1Q15797 465 aaKnown RBP11.82□□□□□ -0.52
SCG2-201ENST00000305409 DEFB115Q30KQ5 88 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 SLC25A52Q3SY17 297 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 SLC9A4Q6AI14 798 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 MFSD5Q6N075 450 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 KCNT2Q6UVM3 1135 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 VSTM1Q6UX27 236 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 C3orf62Q6ZUJ4 267 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 OR10T2Q8NGX3 314 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 ATXN2LQ8WWM7 1075 aaKnown RBP11.82□□□□□ -0.52
SCG2-201ENST00000305409 A0A087WUV0 522 aaPredicted RBP11.82□□□□□ -0.52
SCG2-201ENST00000305409 EBAG9O00559 213 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 TRIM66O15016 1216 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 ALDH1A1P00352 501 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 APRTP07741 180 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 CKBP12277 381 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 NCAM1P13591 858 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 BRAFP15056 766 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 ARL4CP56559 192 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 DSC3Q14574 896 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 PKN2Q16513 984 aaKnown RBP11.82□□□□□ -0.52
SCG2-201ENST00000305409 DPYSL2Q16555 572 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 TRIM71Q2Q1W2 868 aaKnown RBP11.82□□□□□ -0.52
SCG2-201ENST00000305409 MRPL10Q7Z7H8 261 aaKnown RBP11.82□□□□□ -0.52
SCG2-201ENST00000305409 RNF180Q86T96 592 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 C4orf33Q8N1A6 199 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 AGGF1Q8N302 714 aaeCLIP11.82□□□□□ -0.52
SCG2-201ENST00000305409 SCAMP5Q8TAC9 235 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 TMEM51Q9NW97 253 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 PCDH10Q9P2E7 1040 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 RRP15Q9Y3B9 282 aaKnown RBP11.82□□□□□ -0.52
SCG2-201ENST00000305409 PDCD11Q14690 1871 aaKnown RBP11.82□□□□□ -0.52
SCG2-201ENST00000305409 TTC3P53804 2025 aa11.82□□□□□ -0.52
SCG2-201ENST00000305409 RASA4BC9J798 803 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms