RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 ANHXE9PGG2 379 aa25.59■■□□□ 1.69
HOXC9-201ENST00000303450 MDM4O15151 490 aa25.59■■□□□ 1.69
HOXC9-201ENST00000303450 FCARP24071 287 aa25.59■■□□□ 1.69
HOXC9-201ENST00000303450 GSCP56915 257 aaPredicted RBP25.59■■□□□ 1.69
HOXC9-201ENST00000303450 HTR4Q13639 388 aa25.59■■□□□ 1.69
HOXC9-201ENST00000303450 DCAF6Q58WW2 860 aa25.59■■□□□ 1.69
HOXC9-201ENST00000303450 MIB1Q86YT6 1006 aa25.59■■□□□ 1.69
HOXC9-201ENST00000303450 C3orf20Q8ND61 904 aa25.59■■□□□ 1.69
HOXC9-201ENST00000303450 TTC16Q8NEE8 873 aa25.59■■□□□ 1.69
HOXC9-201ENST00000303450 KHSRPQ92945 711 aaKnown RBP eCLIP25.59■■□□□ 1.69
HOXC9-201ENST00000303450 BAG1Q99933 345 aaPredicted RBP25.59■■□□□ 1.69
HOXC9-201ENST00000303450 KXD1Q9BQD3 176 aa25.59■■□□□ 1.69
HOXC9-201ENST00000303450 KIF9Q9HAQ2 790 aa25.59■■□□□ 1.69
HOXC9-201ENST00000303450 SPTLC3Q9NUV7 552 aa25.59■■□□□ 1.69
HOXC9-201ENST00000303450 MARCH2Q9P0N8 246 aa25.59■■□□□ 1.69
HOXC9-201ENST00000303450 NUMBLQ9Y6R0 609 aa25.59■■□□□ 1.69
HOXC9-201ENST00000303450 C19orf67A6NJJ6 358 aa25.58■■□□□ 1.69
HOXC9-201ENST00000303450 FECHP22830 423 aa25.58■■□□□ 1.69
HOXC9-201ENST00000303450 RRM1P23921 792 aa25.58■■□□□ 1.69
HOXC9-201ENST00000303450 DNAJC24Q6P3W2 148 aa25.58■■□□□ 1.69
HOXC9-201ENST00000303450 CCDC170Q8IYT3 715 aa25.58■■□□□ 1.69
HOXC9-201ENST00000303450 DEFB106AQ8N104 65 aa25.58■■□□□ 1.69
HOXC9-201ENST00000303450 NXPE3Q969Y0 559 aa25.58■■□□□ 1.69
HOXC9-201ENST00000303450 ELSPBP1Q96BH3 223 aa25.58■■□□□ 1.69
HOXC9-201ENST00000303450 SLC2A13Q96QE2 648 aa25.58■■□□□ 1.69
HOXC9-201ENST00000303450 SELENOOQ9BVL4 669 aa25.58■■□□□ 1.69
HOXC9-201ENST00000303450 KCNK12Q9HB15 430 aa25.58■■□□□ 1.69
HOXC9-201ENST00000303450 METTL5Q9NRN9 209 aaKnown RBP25.58■■□□□ 1.69
HOXC9-201ENST00000303450 IGSF9Q9P2J2 1179 aa25.58■■□□□ 1.69
HOXC9-201ENST00000303450 ECI2O75521 394 aa25.58■■□□□ 1.68
HOXC9-201ENST00000303450 DAB1O75553 588 aa25.58■■□□□ 1.68
HOXC9-201ENST00000303450 MYBL1P10243 752 aa25.58■■□□□ 1.68
HOXC9-201ENST00000303450 KRT3P12035 628 aa25.58■■□□□ 1.68
HOXC9-201ENST00000303450 ABCB4P21439 1286 aa25.58■■□□□ 1.68
HOXC9-201ENST00000303450 SYPL2Q5VXT5 272 aa25.58■■□□□ 1.68
HOXC9-201ENST00000303450 SH3RF2Q8TEC5 729 aa25.58■■□□□ 1.68
HOXC9-201ENST00000303450 ZNF653Q96CK0 615 aa25.58■■□□□ 1.68
HOXC9-201ENST00000303450 OBP2AQ9NY56 170 aa25.58■■□□□ 1.68
HOXC9-201ENST00000303450 SFMBT1Q9UHJ3 866 aa25.58■■□□□ 1.68
HOXC9-201ENST00000303450 NENFQ9UMX5 172 aa25.58■■□□□ 1.68
HOXC9-201ENST00000303450 MYO10Q9HD67 2058 aa25.57■■□□□ 1.68
HOXC9-201ENST00000303450 HELZP42694 1942 aaKnown RBP25.57■■□□□ 1.68
HOXC9-201ENST00000303450 HEPACAM2A8MVW5 462 aa25.57■■□□□ 1.68
HOXC9-201ENST00000303450 CYLC1P35663 651 aaPredicted RBP25.57■■□□□ 1.68
HOXC9-201ENST00000303450 MSANTD2Q6P1R3 559 aa25.57■■□□□ 1.68
HOXC9-201ENST00000303450 DDX42Q86XP3 938 aaKnown RBP eCLIP25.57■■□□□ 1.68
HOXC9-201ENST00000303450 ADAMTS19Q8TE59 1207 aa25.57■■□□□ 1.68
HOXC9-201ENST00000303450 RSAD2Q8WXG1 361 aa25.57■■□□□ 1.68
HOXC9-201ENST00000303450 KLF16Q9BXK1 252 aaPredicted RBP25.57■■□□□ 1.68
HOXC9-201ENST00000303450 GKN1Q9NS71 199 aa25.57■■□□□ 1.68
HOXC9-201ENST00000303450 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.57■■□□□ 1.68
HOXC9-201ENST00000303450 CNOT8Q9UFF9 292 aaKnown RBP25.57■■□□□ 1.68
HOXC9-201ENST00000303450 TMEM59LQ9UK28 342 aa25.57■■□□□ 1.68
HOXC9-201ENST00000303450 SOWAHDA6NJG2 315 aa25.56■■□□□ 1.68
HOXC9-201ENST00000303450 LEFTY2O00292 366 aa25.56■■□□□ 1.68
HOXC9-201ENST00000303450 ATMINO43313 823 aaPredicted RBP25.56■■□□□ 1.68
HOXC9-201ENST00000303450 ASGR2P07307 311 aa25.56■■□□□ 1.68
HOXC9-201ENST00000303450 NOS2P35228 1153 aa25.56■■□□□ 1.68
HOXC9-201ENST00000303450 MATKP42679 507 aa25.56■■□□□ 1.68
HOXC9-201ENST00000303450 COG7P83436 770 aa25.56■■□□□ 1.68
HOXC9-201ENST00000303450 ARCQ7LC44 396 aa25.56■■□□□ 1.68
HOXC9-201ENST00000303450 GJD3Q8N144 294 aa25.56■■□□□ 1.68
HOXC9-201ENST00000303450 DQX1Q8TE96 717 aaKnown RBP25.56■■□□□ 1.68
HOXC9-201ENST00000303450 RSPRY1Q96DX4 576 aa25.56■■□□□ 1.68
HOXC9-201ENST00000303450 ZFRQ96KR1 1074 aaKnown RBP25.56■■□□□ 1.68
HOXC9-201ENST00000303450 RPP25Q9BUL9 199 aaKnown RBP25.56■■□□□ 1.68
HOXC9-201ENST00000303450 PARVAQ9NVD7 372 aa25.56■■□□□ 1.68
HOXC9-201ENST00000303450 SLC12A8A0AV02 714 aa25.55■■□□□ 1.68
HOXC9-201ENST00000303450 SIGLEC16A6NMB1 481 aa25.55■■□□□ 1.68
HOXC9-201ENST00000303450 GJB6O95452 261 aa25.55■■□□□ 1.68
HOXC9-201ENST00000303450 ZXDBP98169 803 aa25.55■■□□□ 1.68
HOXC9-201ENST00000303450 VITQ6UXI7 678 aa25.55■■□□□ 1.68
HOXC9-201ENST00000303450 MFSD6LQ8IWD5 586 aa25.55■■□□□ 1.68
HOXC9-201ENST00000303450 BPIFB1Q8TDL5 484 aa25.55■■□□□ 1.68
HOXC9-201ENST00000303450 PLA2G2FQ9BZM2 168 aa25.55■■□□□ 1.68
HOXC9-201ENST00000303450 SMOC2Q9H3U7 446 aa25.55■■□□□ 1.68
HOXC9-201ENST00000303450 CFAP97Q9P2B7 532 aa25.55■■□□□ 1.68
HOXC9-201ENST00000303450 MYO1AQ9UBC5 1043 aa25.55■■□□□ 1.68
HOXC9-201ENST00000303450 STAP1Q9ULZ2 295 aa25.55■■□□□ 1.68
HOXC9-201ENST00000303450 ANKRD62A6NC57 917 aa25.54■■□□□ 1.68
HOXC9-201ENST00000303450 IRF1P10914 325 aa25.54■■□□□ 1.68
HOXC9-201ENST00000303450 TCF3P15923 654 aa25.54■■□□□ 1.68
HOXC9-201ENST00000303450 PSMC3P17980 439 aa25.54■■□□□ 1.68
HOXC9-201ENST00000303450 FLT3P36888 993 aa25.54■■□□□ 1.68
HOXC9-201ENST00000303450 GALCP54803 685 aa25.54■■□□□ 1.68
HOXC9-201ENST00000303450 PLEKHA7Q6IQ23 1121 aa25.54■■□□□ 1.68
HOXC9-201ENST00000303450 DCUN1D2Q6PH85 259 aa25.54■■□□□ 1.68
HOXC9-201ENST00000303450 EMC1Q8N766 993 aa25.54■■□□□ 1.68
HOXC9-201ENST00000303450 ADAM32Q8TC27 787 aa25.54■■□□□ 1.68
HOXC9-201ENST00000303450 DEPDC1BQ8WUY9 529 aa25.54■■□□□ 1.68
HOXC9-201ENST00000303450 SERPINB11Q96P15 392 aa25.54■■□□□ 1.68
HOXC9-201ENST00000303450 NECAB3Q96P71 396 aaPredicted RBP25.54■■□□□ 1.68
HOXC9-201ENST00000303450 THAP2Q9H0W7 228 aa25.54■■□□□ 1.68
HOXC9-201ENST00000303450 RRN3Q9NYV6 651 aa25.54■■□□□ 1.68
HOXC9-201ENST00000303450 SH3BP1Q9Y3L3 701 aa25.54■■□□□ 1.68
HOXC9-201ENST00000303450 SCINQ9Y6U3 715 aa25.54■■□□□ 1.68
HOXC9-201ENST00000303450 TCRBV5S1A1TA0A578 114 aa25.53■■□□□ 1.68
HOXC9-201ENST00000303450 MSI1O43347 362 aaKnown RBP25.53■■□□□ 1.68
HOXC9-201ENST00000303450 TRUB2O95900 331 aaKnown RBP25.53■■□□□ 1.68
HOXC9-201ENST00000303450 HMBSP08397 361 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms