RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 PIGHQ14442 188 aaPredicted RBP11.27□□□□□ -0.61
ZNF558-201ENST00000301475 MROH9Q5TGP6 573 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 VWA5B1Q5TIE3 1220 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 NPNTQ6UXI9 565 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 TRIM67Q6ZTA4 783 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 ANO5Q75V66 913 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 POLNQ7Z5Q5 900 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 ZNF554Q86TJ5 538 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 ZNF410Q86VK4 478 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 FBXW8Q8N3Y1 598 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 RIN3Q8TB24 985 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 AKT1S1Q96B36 256 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 NLRP4Q96MN2 994 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 EHMT1Q9H9B1 1298 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 BTBD7Q9P203 1132 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 H3BSA7 217 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 SPAG6O75602 509 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 TRMUO75648 421 aaKnown RBP11.26□□□□□ -0.61
ZNF558-201ENST00000301475 FBXO21O94952 628 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 SRGAP2CP0DJJ0 459 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 SRGAP2BP0DMP2 458 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 CD1EP15812 388 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 CDH2P19022 906 aaPredicted RBP11.26□□□□□ -0.61
ZNF558-201ENST00000301475 ARRB2P32121 409 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 ACOT2P49753 483 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 SERPINB8P50452 374 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 MTTPP55157 894 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 RPL10AP62906 217 aaKnown RBP11.26□□□□□ -0.61
ZNF558-201ENST00000301475 CLDN10P78369 228 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 KRT81Q14533 505 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 TAF5Q15542 800 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 MBLAC2Q68D91 279 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 C16orf46Q6P387 395 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 TSHZ1Q6ZSZ6 1077 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 AHI1Q8N157 1196 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 NIPA2Q8N8Q9 360 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 RAB3IL1Q8TBN0 382 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 PRPF31Q8WWY3 499 aaKnown RBP11.26□□□□□ -0.61
ZNF558-201ENST00000301475 COA1Q9GZY4 146 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 ARHGEF38Q9NXL2 777 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 PLK2Q9NYY3 685 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 TJP2Q9UDY2 1190 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 PSMD13Q9UNM6 376 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 ZNF232Q9UNY5 417 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 CNTN6Q9UQ52 1028 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 APOBEC2Q9Y235 224 aaKnown RBP11.26□□□□□ -0.61
ZNF558-201ENST00000301475 TDRKHQ9Y2W6 561 aaKnown RBP11.26□□□□□ -0.61
ZNF558-201ENST00000301475 ZNF541Q9H0D2 1346 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 PPEF1O14829 653 aaPredicted RBP11.26□□□□□ -0.61
ZNF558-201ENST00000301475 KLHL2O95198 593 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 TNFAIP8O95379 198 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 CALB1P05937 261 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 KDELR1P24390 212 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 PRKCHP24723 683 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 VARSP26640 1264 aaKnown RBP11.26□□□□□ -0.61
ZNF558-201ENST00000301475 CHRNA5P30532 468 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 RFC1P35251 1148 aaPredicted RBP11.26□□□□□ -0.61
ZNF558-201ENST00000301475 CBX3Q13185 183 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 TAZQ16635 292 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 FASTKD1Q53R41 847 aaKnown RBP11.26□□□□□ -0.61
ZNF558-201ENST00000301475 FAXCQ5TGI0 409 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 TRMT10BQ6PF06 316 aaKnown RBP11.26□□□□□ -0.61
ZNF558-201ENST00000301475 ARCQ7LC44 396 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 WDR75Q8IWA0 830 aaKnown RBP11.26□□□□□ -0.61
ZNF558-201ENST00000301475 NUP93Q8N1F7 819 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 JOSD2Q8TAC2 188 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 ACER1Q8TDN7 264 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 AGO4Q9HCK5 861 aaKnown RBP11.26□□□□□ -0.61
ZNF558-201ENST00000301475 TMOD2Q9NZR1 351 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 ARHGAP28Q9P2N2 729 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 SLC9A2Q9UBY0 812 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 ZC3H7BQ9UGR2 993 aaKnown RBP11.26□□□□□ -0.61
ZNF558-201ENST00000301475 EFR3BQ9Y2G0 817 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 CEPT1Q9Y6K0 416 aa11.26□□□□□ -0.61
ZNF558-201ENST00000301475 BOLA2-SMG1P6H3BVE0 249 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 BIRC5O15392 142 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 FGF3P11487 239 aaPredicted RBP11.25□□□□□ -0.61
ZNF558-201ENST00000301475 CRHR1P34998 444 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 IDH3AP50213 366 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 ZNF132P52740 706 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 CDKL1Q00532 357 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 USP41Q3LFD5 358 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 C6orf52Q5T4I8 152 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 PDPK2PQ6A1A2 396 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 AMIGO2Q86SJ2 522 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 SPATA18Q8TC71 538 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 PNPOQ9NVS9 261 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 EMCNQ9ULC0 261 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 LRRC37AA6NMS7 1700 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 G3V3G9 751 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 APOC4-APOC2K7ER74 178 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 MCF2LO15068 1137 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 APOC2P02655 101 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 PSMA2P25787 234 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 LPIN1Q14693 890 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 PSMD6Q15008 389 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 DCAF8Q5TAQ9 597 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 CC2D2BQ6DHV5 1058 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 UBR3Q6ZT12 1888 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 RFX6Q8HWS3 928 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms