RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 DDI1Q8WTU0 396 aa8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 PIK3R5Q8WYR1 880 aa8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 TUBB6Q9BUF5 446 aa8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 PACSIN1Q9BY11 444 aa8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 UNC93B1Q9H1C4 597 aa8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 SLC28A3Q9HAS3 691 aa8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 CACYBPQ9HB71 228 aaKnown RBP8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 TUBGCP4Q9UGJ1 667 aa8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 LAMA4Q16363 1823 aa8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 CCDC85CA6NKD9 419 aa8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 ERI2A8K979 691 aaKnown RBP8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 SH3BP5O60239 455 aa8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 CYP2F1P24903 491 aa8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 HSPA9P38646 679 aaKnown RBP8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 MATKP42679 507 aa8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 MRPS5P82675 430 aaKnown RBP8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 WDR59Q6PJI9 974 aa8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 IRF2BP2Q7Z5L9 587 aa8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 DSG4Q86SJ6 1040 aa8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 CACNA2D3Q8IZS8 1091 aa8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 EIF2AQ9BY44 585 aaKnown RBP8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 LACRTQ9GZZ8 138 aa8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 XPO7Q9UIA9 1087 aaKnown RBP8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 NEU2Q9Y3R4 380 aa8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 CAPN6Q9Y6Q1 641 aa8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 LAMB1P07942 1786 aa8.6□□□□□ -1.03
SNRPD1-201ENST00000300413 MAGEB16A2A368 324 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 E5RI56 91 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 RGS20O76081 388 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 SUN1O94901 812 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 CXCL14O95715 111 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 HSPA8P11142 646 aaKnown RBP8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 OR6P1Q8NGX9 317 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 TEKT4Q8WW24 435 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 ATP6V1E2Q96A05 226 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 RILPQ96NA2 401 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 RBM15Q96T37 977 aaKnown RBP eCLIP8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 PCYT2Q99447 389 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 IRX2Q9BZI1 471 aaPredicted RBP8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 EFR3BQ9Y2G0 817 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 DOCK2Q92608 1830 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 TTLL13PA6NNM8 815 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 ZNF623O75123 536 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 CDH16O75309 829 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 VCPP55072 806 aaKnown RBP8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 LILRA4P59901 499 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 GNGT1P63211 74 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 MAMLD1Q13495 774 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 B3GNT9Q6UX72 402 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 C7orf61Q8IZ16 206 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 EIF1ADQ8N9N8 165 aaKnown RBP8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 CXorf38Q8TB03 319 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 ZNF670Q9BS34 389 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 ADGRE3Q9BY15 652 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 ZC3H7BQ9UGR2 993 aaKnown RBP8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 PKP3Q9Y446 797 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 MYH6P13533 1939 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 APOC4-APOC2K7ER74 178 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 O00370 1275 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 GPC4O75487 556 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 TRUB2O95900 331 aaKnown RBP8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 APOC2P02655 101 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 PYGLP06737 847 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 CES1P23141 567 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 ZNF200P98182 395 aaPredicted RBP8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 NT5DC3Q86UY8 548 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 COG1Q8WTW3 980 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 SHISA4Q96DD7 197 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 FGFBP2Q9BYJ0 223 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 OSGEPQ9NPF4 335 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 RBM12Q9NTZ6 932 aaKnown RBP8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 STXBP5LQ9Y2K9 1186 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 A0A1B0GUL6 1792 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 MMP8P22894 467 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 STX1BP61266 288 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 FRA10AC1Q70Z53 315 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 ILDR2Q71H61 639 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 EMC1Q8N766 993 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 MGARPQ8TDB4 240 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 KAT5Q92993 513 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 LRRC1Q9BTT6 524 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 UPF3AQ9H1J1 476 aaKnown RBP8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 VPS28Q9UK41 221 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 SMG5Q9UPR3 1016 aaKnown RBP8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 PHF24Q9UPV7 400 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 SHOC2Q9UQ13 582 aa8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 GNEQ9Y223 722 aaKnown RBP8.59□□□□□ -1.03
SNRPD1-201ENST00000300413 C2orf81A6NN90 581 aa8.58□□□□□ -1.04
SNRPD1-201ENST00000300413 DDX5P17844 614 aaKnown RBP8.58□□□□□ -1.04
SNRPD1-201ENST00000300413 NR1D1P20393 614 aa8.58□□□□□ -1.04
SNRPD1-201ENST00000300413 MIPP30301 263 aa8.58□□□□□ -1.04
SNRPD1-201ENST00000300413 ADSSP30520 456 aa8.58□□□□□ -1.04
SNRPD1-201ENST00000300413 SPRP35270 261 aaPredicted RBP8.58□□□□□ -1.04
SNRPD1-201ENST00000300413 CDK16Q00536 496 aa8.58□□□□□ -1.04
SNRPD1-201ENST00000300413 OTUD4Q01804 1114 aaKnown RBP8.58□□□□□ -1.04
SNRPD1-201ENST00000300413 KRT33BQ14525 404 aa8.58□□□□□ -1.04
SNRPD1-201ENST00000300413 CCDC6Q16204 474 aa8.58□□□□□ -1.04
SNRPD1-201ENST00000300413 SCUBE3Q8IX30 993 aa8.58□□□□□ -1.04
SNRPD1-201ENST00000300413 PPM1NQ8N819 430 aa8.58□□□□□ -1.04
SNRPD1-201ENST00000300413 TMA16Q96EY4 203 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms