RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 FARP1Q9Y4F1 1045 aaPredicted RBP13.19□□□□□ -0.3
CLPX-201ENST00000300107 A0A087WXM4 84 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 A0A1B0GW55 424 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 HMBSP08397 361 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 DUX4L2P0CJ85 424 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 DUX4L3P0CJ86 424 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 DUX4L4P0CJ87 422 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 DUX4L5P0CJ88 424 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 DUX4L6P0CJ89 424 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 DUX4L7P0CJ90 424 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 PNPLA4P41247 253 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 TMEM62Q0P6H9 643 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 ATP6AP1LQ52LC2 224 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.18□□□□□ -0.3
CLPX-201ENST00000300107 PRELID2Q8N945 189 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 COLGALT1Q8NBJ5 622 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 PRMT6Q96LA8 375 aaPredicted RBP13.18□□□□□ -0.3
CLPX-201ENST00000300107 APOL5Q9BWW9 433 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 LRMDAQ9H2I8 198 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 DUX4Q9UBX2 424 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 COPG1Q9Y678 874 aaKnown RBP13.18□□□□□ -0.3
CLPX-201ENST00000300107 USP32Q8NFA0 1604 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 BTNL10A8MVZ5 291 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 GOLGA8TH3BQL2 631 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 AP1G2O75843 785 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 F9P00740 461 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 ATP6V1C1P21283 382 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 TAF6P49848 677 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 CCDC142Q17RM4 750 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 GLRA4Q5JXX5 417 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 CACHD1Q5VU97 1274 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 SNX32Q86XE0 403 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 TMEM139Q8IV31 216 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 STKLD1Q8NE28 680 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 DPP3Q9NY33 737 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 GPRC5DQ9NZD1 345 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 VTI1BQ9UEU0 232 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 TUBGCP4Q9UGJ1 667 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 TRMT6Q9UJA5 497 aaKnown RBP13.18□□□□□ -0.3
CLPX-201ENST00000300107 CAB39Q9Y376 341 aaPredicted RBP13.18□□□□□ -0.3
CLPX-201ENST00000300107 REXO2Q9Y3B8 237 aaKnown RBP13.18□□□□□ -0.3
CLPX-201ENST00000300107 MT-CO1P00395 513 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 JCHAINP01591 159 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 ZNF157P51786 506 aaPredicted RBP13.18□□□□□ -0.3
CLPX-201ENST00000300107 PDK4Q16654 411 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 ZRANB3Q5FWF4 1079 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 B3GNT6Q6ZMB0 384 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 EXOC3L1Q86VI1 746 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 DHFR2Q86XF0 187 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 POLLQ9UGP5 575 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 ZC3H4Q9UPT8 1303 aaKnown RBP13.18□□□□□ -0.3
CLPX-201ENST00000300107 KPNA4O00629 521 aaPredicted RBP13.18□□□□□ -0.3
CLPX-201ENST00000300107 STX7O15400 261 aaKnown RBP13.18□□□□□ -0.3
CLPX-201ENST00000300107 AKT1P31749 480 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 BLVRAP53004 296 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 C21orf59P57076 290 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 TWF1Q12792 350 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 CSHL1Q14406 222 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 CBWD6Q4V339 395 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 CBWD3Q5JTY5 395 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 CBWD5Q5RIA9 395 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 KYAT3Q6YP21 454 aaKnown RBP13.18□□□□□ -0.3
CLPX-201ENST00000300107 ZCCHC23Q6ZST2 131 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 OR6J1Q8NGC5 347 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 ACER1Q8TDN7 264 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 GMCL1Q96IK5 515 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 MAGED4Q96JG8 741 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 TBCBQ99426 244 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 GPAMQ9HCL2 828 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 SLC38A7Q9NVC3 462 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 RNF112Q9ULX5 631 aa13.18□□□□□ -0.3
CLPX-201ENST00000300107 VWA5AO00534 786 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 EFCAB14O75071 495 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 MPOP05164 745 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 SOX6P35712 828 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 RARRES1P49788 294 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 CDK7P50613 346 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 PPATQ06203 517 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 VEPH1Q14D04 833 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 NFIL3Q16649 462 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 AADACL2Q6P093 401 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 WDR49Q8IV35 697 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 SNX31Q8N9S9 440 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 MTERF3Q96E29 417 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 FOPNLQ96NB1 174 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 BDH2Q9BUT1 245 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 CYLDQ9NQC7 956 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 H2AFY2Q9P0M6 372 aaPredicted RBP13.17□□□□□ -0.3
CLPX-201ENST00000300107 UBQLN1Q9UMX0 589 aaKnown RBP13.17□□□□□ -0.3
CLPX-201ENST00000300107 DRG1Q9Y295 367 aaKnown RBP13.17□□□□□ -0.3
CLPX-201ENST00000300107 A0A096LPK6 155 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 ETFBP38117 255 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 PBX1P40424 430 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 SKIV2L2P42285 1042 aaKnown RBP13.17□□□□□ -0.3
CLPX-201ENST00000300107 PRKAA2P54646 552 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 KCTD21Q4G0X4 260 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 KATNAL2Q8IYT4 538 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 ZNF483Q8TF39 744 aaPredicted RBP13.17□□□□□ -0.3
CLPX-201ENST00000300107 PHF21AQ96BD5 680 aa13.17□□□□□ -0.3
CLPX-201ENST00000300107 SH3GL1Q99961 368 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms