RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 HP1BP3Q5SSJ5 553 aaPredicted RBP26.69■■□□□ 1.86
SDCCAG3-201ENST00000298537 STRADAQ7RTN6 431 aa26.69■■□□□ 1.86
SDCCAG3-201ENST00000298537 MAP7D3Q8IWC1 876 aa26.69■■□□□ 1.86
SDCCAG3-201ENST00000298537 TTC13Q8NBP0 860 aa26.69■■□□□ 1.86
SDCCAG3-201ENST00000298537 URGCPQ8TCY9 931 aa26.69■■□□□ 1.86
SDCCAG3-201ENST00000298537 P3H4Q92791 437 aa26.69■■□□□ 1.86
SDCCAG3-201ENST00000298537 FTHL17Q9BXU8 183 aa26.69■■□□□ 1.86
SDCCAG3-201ENST00000298537 OGDHLQ9ULD0 1010 aa26.69■■□□□ 1.86
SDCCAG3-201ENST00000298537 SMIM23A6NLE4 172 aa26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 GOT1P17174 413 aa26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 RPL22P35268 128 aaKnown RBP26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 PGFP49763 221 aa26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 MTM1Q13496 603 aa26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 BNIPLQ7Z465 357 aa26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 SLC7A14Q8TBB6 771 aa26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 NRDE2Q9H7Z3 1164 aa26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 CWC15Q9P013 229 aaKnown RBP26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 BCCIPQ9P287 314 aaKnown RBP eCLIP26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 TTC3P53804 2025 aa26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 GOLGA8MH3BSY2 632 aa26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 ZBED1O96006 694 aa26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 GBE1Q04446 702 aa26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 SLC10A2Q12908 348 aaPredicted RBP26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 KYNUQ16719 465 aa26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 SYCP2LQ5T4T6 812 aa26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 ANKRD22Q5VYY1 191 aa26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 DENND2CQ68D51 928 aa26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 CASD1Q96PB1 797 aa26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 PCDH9Q9HC56 1237 aa26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 DSEQ9UL01 958 aa26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 FZD10Q9ULW2 581 aa26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 PCDHB8Q9UN66 801 aa26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 NR2E3Q9Y5X4 410 aa26.68■■□□□ 1.86
SDCCAG3-201ENST00000298537 NT5C1B-RDH14C9J2C7 533 aa26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 APOL1O14791 398 aa26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 MCF2LO15068 1137 aa26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 NCAM1P13591 858 aa26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 KRT71Q3SY84 523 aa26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 SLC9A4Q6AI14 798 aa26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 FAM76AQ8TAV0 307 aa26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 RSAD2Q8WXG1 361 aa26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 FAF2Q96CS3 445 aa26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 ATP6V1G3Q96LB4 118 aa26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 BANF1O75531 89 aa26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 AMPD1P23109 780 aa26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 IFFO1Q0D2I5 559 aa26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 SLMAPQ14BN4 828 aa26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 SLC39A12Q504Y0 691 aa26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 SDHAF4Q5VUM1 108 aa26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 TTC19Q6DKK2 380 aaPredicted RBP26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 DEFB128Q7Z7B8 93 aa26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 DIS3LQ8TF46 1054 aaKnown RBP26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 CSPG4P5Q96PW8 444 aa26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 ZNF670Q9BS34 389 aa26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 CNGB3Q9NQW8 809 aa26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 PCDHB7Q9Y5E2 793 aa26.67■■□□□ 1.86
SDCCAG3-201ENST00000298537 TCRBV7S3A2A0A539 114 aa26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 CAPN9O14815 690 aa26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 NUDT17P0C025 328 aa26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 MYZAPP0CAP1 466 aa26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 DESP17661 470 aa26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 CYP2C18P33260 490 aa26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 LMAN1P49257 510 aa26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 ATP1A2P50993 1020 aa26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 TFDP2Q14188 446 aa26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 RNASEH2BQ5TBB1 312 aaKnown RBP26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 DARS2Q6PI48 645 aaKnown RBP26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 NLRC5Q86WI3 1866 aa26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 THEM5Q8N1Q8 247 aa26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 C9orf72Q96LT7 481 aa26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 FAM193BQ96PV7 902 aaPredicted RBP26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 GPR62Q9BZJ7 368 aa26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 TPX2Q9ULW0 747 aaKnown RBP26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 ZNF638Q14966 1978 aaKnown RBP26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 TYMPP19971 482 aa26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 SLCO1A2P46721 670 aa26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 FASTKD3Q14CZ7 662 aaKnown RBP26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 TMEM173Q86WV6 379 aaPredicted RBP26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 CEP57Q86XR8 500 aa26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 EPS8L3Q8TE67 593 aaKnown RBP26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 ZKSCAN7Q9P0L1 754 aaPredicted RBP26.66■■□□□ 1.86
SDCCAG3-201ENST00000298537 H7C0C1 242 aa26.65■■□□□ 1.86
SDCCAG3-201ENST00000298537 LTFP02788 710 aa26.65■■□□□ 1.86
SDCCAG3-201ENST00000298537 ATP5OP48047 213 aa26.65■■□□□ 1.86
SDCCAG3-201ENST00000298537 DEUP1Q05D60 604 aa26.65■■□□□ 1.86
SDCCAG3-201ENST00000298537 DMAP1Q9NPF5 467 aaPredicted RBP26.65■■□□□ 1.86
SDCCAG3-201ENST00000298537 USP3Q9Y6I4 520 aa26.65■■□□□ 1.86
SDCCAG3-201ENST00000298537 TLDC2A0PJX2 215 aa26.65■■□□□ 1.86
SDCCAG3-201ENST00000298537 GPR15P49685 360 aa26.65■■□□□ 1.86
SDCCAG3-201ENST00000298537 CTCFP49711 727 aaPredicted RBP26.65■■□□□ 1.86
SDCCAG3-201ENST00000298537 TSPY1Q01534 308 aa26.65■■□□□ 1.86
SDCCAG3-201ENST00000298537 ROR1Q01973 937 aa26.65■■□□□ 1.86
SDCCAG3-201ENST00000298537 FAAP100Q0VG06 881 aa26.65■■□□□ 1.86
SDCCAG3-201ENST00000298537 ABI1Q8IZP0 508 aa26.65■■□□□ 1.86
SDCCAG3-201ENST00000298537 EXOC4Q96A65 974 aa26.65■■□□□ 1.86
SDCCAG3-201ENST00000298537 PGLYRP2Q96PD5 576 aa26.65■■□□□ 1.86
SDCCAG3-201ENST00000298537 FAM129AQ9BZQ8 928 aa26.65■■□□□ 1.86
SDCCAG3-201ENST00000298537 HIPK3Q9H422 1215 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms