RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 SUSD6Q92537 303 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 SECISBP2LQ93073 1101 aaKnown RBP6.23□□□□□ -1.41
SSX3-201ENST00000298396 SMARCD1Q96GM5 515 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 ABHD17AQ96GS6 310 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 SPATA17Q96L03 361 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 C8orf48Q96LL4 319 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 FAM81BQ96LP2 452 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 DNAJC7Q99615 494 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 ANP32EQ9BTT0 268 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 MED10Q9BTT4 135 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 DUSP16Q9BY84 665 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 EDEM3Q9BZQ6 932 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 PLEKHA4Q9H4M7 779 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 SFXN1Q9H9B4 322 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 GRPEL1Q9HAV7 217 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 BRD7Q9NPI1 651 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 DZANK1Q9NVP4 752 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 IL37Q9NZH6 218 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 AIPL1Q9NZN9 384 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 DNMT3BQ9UBC3 853 aaKnown RBP6.23□□□□□ -1.41
SSX3-201ENST00000298396 MAFFQ9ULX9 164 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 MYO6Q9UM54 1294 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 NENFQ9UMX5 172 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 CHD5Q8TDI0 1954 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 NUP205Q92621 2012 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 NCANO14594 1321 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 FAM92AA1XBS5 289 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 CDC14CA4D256 554 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 SLC38A8A6NNN8 435 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 M0QYV0 167 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 PRRG1O14668 218 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 XPO1O14980 1071 aaKnown RBP6.22□□□□□ -1.41
SSX3-201ENST00000298396 ABL1P00519 1130 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 CYP1A1P04798 512 aaPredicted RBP6.22□□□□□ -1.41
SSX3-201ENST00000298396 HNRNPA1P09651 372 aaKnown RBP eCLIP6.22□□□□□ -1.41
SSX3-201ENST00000298396 FAM200BP0CF97 657 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 KCNA5P22460 613 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 HNRNPH3P31942 346 aaKnown RBP6.22□□□□□ -1.41
SSX3-201ENST00000298396 CDH5P33151 784 aaPredicted RBP6.22□□□□□ -1.41
SSX3-201ENST00000298396 GRIK1P39086 918 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 PRKCIP41743 596 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 STAT1P42224 750 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 RGS7P49802 495 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 KIF11P52732 1056 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 SLC5A3P53794 718 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 BCAT1P54687 386 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 EPHA5P54756 1037 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 ADKP55263 362 aaKnown RBP6.22□□□□□ -1.41
SSX3-201ENST00000298396 NOMO3P69849 1222 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 CDR2Q01850 454 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 BST2Q10589 180 aaKnown RBP6.22□□□□□ -1.41
SSX3-201ENST00000298396 PLD1Q13393 1074 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 MEA1Q16626 185 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 PTPN20Q4JDL3 420 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 PPM1LQ5SGD2 360 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 STXBP5Q5T5C0 1151 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 LIN9Q5TKA1 542 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 FOXR1Q6PIV2 292 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 CCDC149Q6ZUS6 474 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 CACNA2D4Q7Z3S7 1137 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 DNAJB7Q7Z6W7 309 aaPredicted RBP6.22□□□□□ -1.41
SSX3-201ENST00000298396 GPR149Q86SP6 731 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 PIGZQ86VD9 579 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 TMEM139Q8IV31 216 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 SCN4BQ8IWT1 228 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 C1orf131Q8NDD1 294 aaKnown RBP6.22□□□□□ -1.41
SSX3-201ENST00000298396 SLC30A5Q8TAD4 765 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 ITFG1Q8TB96 612 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 SHKBP1Q8TBC3 707 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 CLEC4CQ8WTT0 213 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 SLC35F5Q8WV83 523 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 SMG7Q92540 1137 aaKnown RBP6.22□□□□□ -1.41
SSX3-201ENST00000298396 NDRG1Q92597 394 aaKnown RBP6.22□□□□□ -1.41
SSX3-201ENST00000298396 PPP2R3CQ969Q6 453 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 PSMG2Q969U7 264 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 PIWIL1Q96J94 861 aaKnown RBP6.22□□□□□ -1.41
SSX3-201ENST00000298396 SPAG5Q96R06 1193 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 CPXM1Q96SM3 734 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 NUP58Q9BVL2 599 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 TTLL2Q9BWV7 592 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 ADAM7Q9H2U9 754 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 POMKQ9H5K3 350 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 HAUS4Q9H6D7 363 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 DMAP1Q9NPF5 467 aaPredicted RBP6.22□□□□□ -1.41
SSX3-201ENST00000298396 AVENQ9NQS1 362 aaPredicted RBP6.22□□□□□ -1.41
SSX3-201ENST00000298396 OSER1Q9NX31 292 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 ZDHHC7Q9NXF8 308 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 TAS2R14Q9NYV8 317 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 ARHGAP20Q9P2F6 1191 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 CD207Q9UJ71 328 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 KIAA1257Q9ULG3 409 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 USP15Q9Y4E8 981 aaPredicted RBP6.22□□□□□ -1.41
SSX3-201ENST00000298396 KCNMB2Q9Y691 235 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 MUC3AQ02505 3323 aa6.22□□□□□ -1.41
SSX3-201ENST00000298396 CUL9Q8IWT3 2517 aa6.21□□□□□ -1.42
SSX3-201ENST00000298396 GOLGA6L3A6NEY3 463 aa6.21□□□□□ -1.42
SSX3-201ENST00000298396 PIK3R2O00459 728 aa6.21□□□□□ -1.42
SSX3-201ENST00000298396 DDX3XO00571 662 aaKnown RBP eCLIP6.21□□□□□ -1.42
SSX3-201ENST00000298396 MBTPS2O43462 519 aa6.21□□□□□ -1.42
SSX3-201ENST00000298396 NCK2O43639 380 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms