RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 SERPINB12Q96P63 405 aa15.9■□□□□ 0.14
FNDC1-201ENST00000297267 ABCE1P61221 599 aaKnown RBP15.9■□□□□ 0.14
FNDC1-201ENST00000297267 CNTN2Q02246 1040 aa15.9■□□□□ 0.14
FNDC1-201ENST00000297267 SDHAF4Q5VUM1 108 aa15.9■□□□□ 0.14
FNDC1-201ENST00000297267 MICU2Q8IYU8 434 aa15.9■□□□□ 0.14
FNDC1-201ENST00000297267 PCYOX1LQ8NBM8 494 aa15.9■□□□□ 0.14
FNDC1-201ENST00000297267 STKLD1Q8NE28 680 aa15.9■□□□□ 0.14
FNDC1-201ENST00000297267 ZNF333Q96JL9 665 aa15.9■□□□□ 0.14
FNDC1-201ENST00000297267 ERGIC2Q96RQ1 377 aa15.9■□□□□ 0.14
FNDC1-201ENST00000297267 PABPC3Q9H361 631 aaKnown RBP15.9■□□□□ 0.14
FNDC1-201ENST00000297267 KCNK1O00180 336 aa15.9■□□□□ 0.14
FNDC1-201ENST00000297267 SUPT20HL2P0C7V6 817 aa15.9■□□□□ 0.14
FNDC1-201ENST00000297267 FMO4P31512 558 aa15.9■□□□□ 0.14
FNDC1-201ENST00000297267 CALR3Q96L12 384 aaKnown RBP15.9■□□□□ 0.14
FNDC1-201ENST00000297267 SHOC2Q9UQ13 582 aa15.9■□□□□ 0.14
FNDC1-201ENST00000297267 GNG14A0A1W2PPG7 69 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 VWA5AO00534 786 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 HALP42357 657 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 EDRF1Q3B7T1 1238 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 TTMPQ5BVD1 217 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 EFHC1Q5JVL4 640 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 GLB1LQ6UWU2 654 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 TMEM176AQ96HP8 235 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 KCNK16Q96T55 309 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 RRAGCQ9HB90 399 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 TCRBV5S4A2TA0A5A2 114 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 DSG3P32926 999 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 ALDH7A1P49419 539 aaKnown RBP15.89■□□□□ 0.13
FNDC1-201ENST00000297267 IL17AQ16552 155 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 LRRC6Q86X45 466 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 STX7O15400 261 aaKnown RBP15.89■□□□□ 0.13
FNDC1-201ENST00000297267 NPM3O75607 178 aaKnown RBP15.89■□□□□ 0.13
FNDC1-201ENST00000297267 RFC5P40937 340 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 PLEKHA7Q6IQ23 1121 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 MPZL3Q6UWV2 235 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 TPGS1Q6ZTW0 290 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 ZNF720Q7Z2F6 126 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 CYLDQ9NQC7 956 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 DONSONQ9NYP3 566 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 PSTPIP1O43586 416 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 MSX2P35548 267 aaPredicted RBP15.89■□□□□ 0.13
FNDC1-201ENST00000297267 FAM83EQ2M2I3 478 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 HHIPL2Q6UWX4 724 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 RSPH1Q8WYR4 309 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 SGSM3Q96HU1 749 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 PLEKHG2Q9H7P9 1386 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 LACTBL1A8MY62 500 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 HBP1O60381 514 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 HMGCRP04035 888 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 HOXD10P28358 340 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 PGM5Q15124 567 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 ZCWPW2Q504Y3 356 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 ERAP2Q6P179 960 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 MILR1Q7Z6M3 343 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 MAN1C1Q9NR34 630 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 CCDC167Q9P0B6 97 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 TSPAN16Q9UKR8 245 aa15.89■□□□□ 0.13
FNDC1-201ENST00000297267 F5H5T6 163 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 P4HA2O15460 535 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 KRT8P05787 483 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 RARAP10276 462 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 LLGL2Q6P1M3 1020 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 CHMP1BQ7LBR1 199 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 PHF21AQ96BD5 680 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 POMKQ9H5K3 350 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 ZFYVE28Q9HCC9 887 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 GPAMQ9HCL2 828 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 VANGL2Q9ULK5 521 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 F8W810 466 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 TRAPPC3O43617 180 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 APOA1P02647 267 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 SARSP49591 514 aaKnown RBP15.88■□□□□ 0.13
FNDC1-201ENST00000297267 NDNQ99608 321 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 CIPCQ9C0C6 399 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 PXDNQ92626 1479 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 HIRAP54198 1017 aaPredicted RBP15.88■□□□□ 0.13
FNDC1-201ENST00000297267 FAAP100Q0VG06 881 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 UBAP2LQ14157 1087 aaKnown RBP15.88■□□□□ 0.13
FNDC1-201ENST00000297267 TRIP4Q15650 581 aaPredicted RBP15.88■□□□□ 0.13
FNDC1-201ENST00000297267 LPAR1Q92633 364 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 ZFYVE1Q9HBF4 777 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 RAG1P15918 1043 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 CAPZA2P47755 286 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 SERPINB8P50452 374 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 IL5RAQ01344 420 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 PACS2Q86VP3 889 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 RDM1Q8NG50 284 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 UTP15Q8TED0 518 aaKnown RBP15.88■□□□□ 0.13
FNDC1-201ENST00000297267 CCDC134Q9H6E4 229 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 VPS28Q9UK41 221 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 PTPRMP28827 1452 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 PSMA4P25789 261 aaKnown RBP15.88■□□□□ 0.13
FNDC1-201ENST00000297267 CTXN3Q4LDR2 81 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 SNX30Q5VWJ9 437 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 PRR23CQ6ZRP0 262 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 TRIM48Q8IWZ4 208 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.88■□□□□ 0.13
FNDC1-201ENST00000297267 CENPTQ96BT3 561 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 GID8Q9NWU2 228 aa15.88■□□□□ 0.13
FNDC1-201ENST00000297267 WDR35Q9P2L0 1181 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms