RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 SSUH2Q9Y2M2 353 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 ASPMQ8IZT6 3477 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 FAM221BA6H8Z2 402 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 TBC1D3BA6NDS4 549 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 ANTXRLA6NF34 631 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 ARHGAP6O43182 974 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 OPHN1O60890 802 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 ADAM23O75077 832 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 ZNF217O75362 1048 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 PRPF6O94906 941 aaKnown RBP11.19□□□□□ -0.62
RFC4-201ENST00000296273 RTN3O95197 1032 aaPredicted RBP11.19□□□□□ -0.62
RFC4-201ENST00000296273 CFIP05156 583 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 PDGFRBP09619 1106 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 GNL1P36915 607 aaPredicted RBP11.19□□□□□ -0.62
RFC4-201ENST00000296273 CASP5P51878 434 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 RPL6Q02878 288 aaKnown RBP11.19□□□□□ -0.62
RFC4-201ENST00000296273 ZNF423Q2M1K9 1284 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 EMC10Q5UCC4 262 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 SCARA3Q6AZY7 606 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 KIAA1211LQ6NV74 962 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 HS2ST1Q7LGA3 356 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 C12orf40Q86WS4 652 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 NUP93Q8N1F7 819 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 ZNF513Q8N8E2 541 aaPredicted RBP11.19□□□□□ -0.62
RFC4-201ENST00000296273 OR5B17Q8NGF7 314 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 PANX2Q96RD6 677 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 BLZF1Q9H2G9 400 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 SNX25Q9H3E2 840 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 PANK4Q9NVE7 773 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 SMPD4Q9NXE4 827 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 DEC1Q9P2X7 70 aa11.19□□□□□ -0.62
RFC4-201ENST00000296273 TNRC6BQ9UPQ9 1833 aaKnown RBP11.19□□□□□ -0.62
RFC4-201ENST00000296273 PTPRDP23468 1912 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 PLXND1Q9Y4D7 1925 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 SYPP08247 313 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 CD44P16070 742 aaKnown RBP11.18□□□□□ -0.62
RFC4-201ENST00000296273 PTPN1P18031 435 aaKnown RBP11.18□□□□□ -0.62
RFC4-201ENST00000296273 ITPKAP23677 461 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 YWHAQP27348 245 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 PRCPP42785 496 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 ASIC1P78348 528 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 KDSRQ06136 332 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 ZNF33AQ06730 810 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 MESP2Q0VG99 397 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 LRMPQ12912 555 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 SLC14A1Q13336 389 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 TCP11X2Q5H9J9 407 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 MDH1BQ5I0G3 518 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 LY6G5CQ5SRR4 150 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 KLHL10Q6JEL2 608 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 TRAPPC11Q7Z392 1133 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 CNGA4Q8IV77 575 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 SFTPA1Q8IWL2 248 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 ETFBKMTQ8IXQ9 262 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 CCDC65Q8IXS2 484 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 ABCA7Q8IZY2 2146 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 PHTF2Q8N3S3 785 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 FRMD1Q8N878 549 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 OR6B3Q8NGW1 331 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 NUP58Q9BVL2 599 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 CAPN10Q9HC96 672 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 SAMSN1Q9NSI8 373 aaKnown RBP11.18□□□□□ -0.62
RFC4-201ENST00000296273 KLK13Q9UKR3 277 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 LHX6Q9UPM6 363 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 CTNND2Q9UQB3 1225 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 SH3BP1Q9Y3L3 701 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 STARD13Q9Y3M8 1113 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 PTPRJQ12913 1337 aa11.18□□□□□ -0.62
RFC4-201ENST00000296273 ATXN2Q99700 1313 aaKnown RBP11.18□□□□□ -0.62
RFC4-201ENST00000296273 A0A1W2PQC6 194 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 ARHGAP33O14559 1287 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 HOXC11O43248 304 aaPredicted RBP11.17□□□□□ -0.62
RFC4-201ENST00000296273 HOXB2P14652 356 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 NTSR1P30989 418 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 TUBP50607 506 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 TNNC1P63316 161 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 LRRC63Q05C16 580 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 RING1Q06587 406 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 IFRD2Q12894 506 aaPredicted RBP11.17□□□□□ -0.62
RFC4-201ENST00000296273 HECTD3Q5T447 861 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 SNX30Q5VWJ9 437 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 SDE2Q6IQ49 451 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 CBWD2Q8IUF1 395 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 CCAR2Q8N163 923 aaKnown RBP11.17□□□□□ -0.62
RFC4-201ENST00000296273 GUF1Q8N442 669 aaKnown RBP11.17□□□□□ -0.62
RFC4-201ENST00000296273 MINDY1Q8N5J2 469 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 TERB1Q8NA31 727 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 FBXO32Q969P5 355 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 FAM84AQ96KN4 292 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 MED15Q96RN5 788 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 MRPL45Q9BRJ2 306 aaKnown RBP11.17□□□□□ -0.62
RFC4-201ENST00000296273 GTPBP2Q9BX10 602 aaKnown RBP11.17□□□□□ -0.62
RFC4-201ENST00000296273 SPHK2Q9NRA0 654 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 DNAAF2Q9NVR5 837 aaKnown RBP11.17□□□□□ -0.62
RFC4-201ENST00000296273 COMMD8Q9NX08 183 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 HSPBP1Q9NZL4 362 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 ATP8B3O60423 1300 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 FAM208BQ5VWN6 2430 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 SPEGQ15772 3267 aa11.17□□□□□ -0.62
RFC4-201ENST00000296273 SPAARA0A1B0GVQ0 90 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms