RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 C10orf120Q5SQS8 335 aa15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 ANGEL2Q5VTE6 544 aaKnown RBP15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 FBXL16Q8N461 479 aa15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 CELF6Q96J87 481 aaKnown RBP15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 VANGL2Q9ULK5 521 aa15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 EML1O00423 815 aa15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 NBNO60934 754 aa15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 ENTPD5O75356 428 aa15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 ZNF189O75820 626 aaPredicted RBP15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 KRT36O76013 467 aa15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 SLITRK3O94933 977 aa15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 TNFRSF8P28908 595 aa15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 PTDSS1P48651 473 aaKnown RBP15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 PPIDQ08752 370 aaKnown RBP15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 AUHQ13825 339 aaKnown RBP15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 ACAP1Q15027 740 aa15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 JADE3Q92613 823 aa15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 ABI2Q9NYB9 513 aaPredicted RBP15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 TRMT6Q9UJA5 497 aaKnown RBP15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 DDTLA6NHG4 134 aaPredicted RBP15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 TIMM44O43615 452 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 SNX3O60493 162 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 HSMCR30P0CW71 290 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 MZF1P28698 734 aaPredicted RBP15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 POU6F1Q14863 301 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 PGM2Q96G03 612 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 TMEM176AQ96HP8 235 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 ABHD8Q96I13 439 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 ZBED2Q9BTP6 218 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 SOAT2O75908 522 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 ANXA9O76027 345 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 ACO1P21399 889 aaKnown RBP15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 NCKAP1LP55160 1127 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 CASP7P55210 303 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 DDX39BQ13838 428 aaKnown RBP15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 ADRM1Q16186 407 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 CYP51A1Q16850 503 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 MPZL3Q6UWV2 235 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 CHSY1Q86X52 802 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 CKAP2Q8WWK9 683 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 DDX50Q9BQ39 737 aaKnown RBP15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 MAP3K20Q9NYL2 800 aaKnown RBP15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 REXO2Q9Y3B8 237 aaKnown RBP15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 MICAL2O94851 1124 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 NAMPTP43490 491 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 MPP3Q13368 585 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 ERMARDQ5T6L9 678 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 SNX32Q86XE0 403 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 PCDHGC5Q9Y5F6 944 aa15.77■□□□□ 0.11
SHROOM4-201ENST00000289292 FAM95CA0A1B0GW59 222 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 WNT7AO00755 349 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 ENDOD1O94919 500 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 GSTT1P30711 240 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 MRPS22P82650 360 aaKnown RBP15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 SLC25A3Q00325 362 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 OR8H2Q8N162 312 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 GPRASP2Q96D09 838 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 CDRT15Q96T59 188 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 HEATR9A2RTY3 570 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 EVPLLA8MZ36 301 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 TNPO2O14787 897 aaKnown RBP15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 GEMP55040 296 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 CHRNB3Q05901 458 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 UBAP2LQ14157 1087 aaKnown RBP15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 ZNF184Q99676 751 aaPredicted RBP15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 CD163L1Q9NR16 1453 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 SLIT1O75093 1534 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 WTIPA6NIX2 430 aaPredicted RBP15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 ANKRD63C9JTQ0 380 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 TAF6P49848 677 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 MCL1Q07820 350 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 BHLHE22Q8NFJ8 381 aaPredicted RBP15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 HASPINQ8TF76 798 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 CINPQ9BW66 212 aaPredicted RBP15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 BTBD7Q9P203 1132 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 SOX13Q9UN79 622 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 NWD1Q149M9 1564 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 CPSF4O95639 269 aaKnown RBP15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 JCHAINP01591 159 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 PEX5P50542 639 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 CRADDP78560 199 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 NFIL3Q16649 462 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 TMC2Q8TDI7 906 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 FIG4Q92562 907 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 PRMT6Q96LA8 375 aaPredicted RBP15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 COQ7Q99807 217 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 ROGDIQ9GZN7 287 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 CNGB3Q9NQW8 809 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 ERAP1Q9NZ08 941 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 ERI2A8K979 691 aaKnown RBP15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 UBDO15205 165 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 SUPT20HL2P0C7V6 817 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 MOXD1Q6UVY6 613 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 SLC44A2Q8IWA5 706 aaPredicted RBP15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 GPAMQ9HCL2 828 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 ZNRF3Q9ULT6 936 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 MROH7Q68CQ1 1323 aa15.76■□□□□ 0.11
SHROOM4-201ENST00000289292 VWA5AO00534 786 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms