RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 CRNNQ9UBG3 495 aaPredicted RBP8.97□□□□□ -0.97
NIPBL-201ENST00000282516 A0A1B0GTH6 734 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 CYP7B1O75881 506 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 OLFML2AQ68BL7 652 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 KDM7AQ6ZMT4 941 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 RASGRP2Q7LDG7 609 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 EEF1AKMT1Q8WVE0 214 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 VCPKMTQ9H867 229 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 PLA2G6O60733 806 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 BOLA3Q53S33 107 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 TMEM8AQ9HCN3 771 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 FLT1P17948 1338 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 KHDRBS3O75525 346 aaKnown RBP8.97□□□□□ -0.97
NIPBL-201ENST00000282516 RHOBTB3O94955 611 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 ATP5BP06576 529 aaKnown RBP8.97□□□□□ -0.97
NIPBL-201ENST00000282516 ITGA4P13612 1032 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 NME5P56597 212 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 ATP2C1P98194 919 aaPredicted RBP8.97□□□□□ -0.97
NIPBL-201ENST00000282516 ALG11Q2TAA5 492 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 TBCELQ5QJ74 424 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 SGF29Q96ES7 293 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 MASTLQ96GX5 879 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 TMEM106CQ9BVX2 250 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 ACTR8Q9H981 624 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 LRCH1Q9Y2L9 728 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 PCDHB7Q9Y5E2 793 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 PRODHO43272 600 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 SUPT7LO94864 414 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 HIST1H2ABP04908 130 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 PRR29P0C7W0 189 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 SRP54P61011 504 aaKnown RBP8.96□□□□□ -0.97
NIPBL-201ENST00000282516 NEDD8Q15843 81 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 HIST3H2AQ7L7L0 130 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 HIST1H2ACQ93077 130 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 MYLPFQ96A32 169 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 LY9Q9HBG7 655 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 MROH7-TTC4A0A0A0MT08 1334 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 TRIM66O15016 1216 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 RAD51BO15315 384 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 PDK2Q15119 407 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 KBTBD8Q8NFY9 601 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 ZNF483Q8TF39 744 aaPredicted RBP8.96□□□□□ -0.97
NIPBL-201ENST00000282516 USP7Q93009 1102 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 UGT2B28Q9BY64 529 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 SEC31BQ9NQW1 1179 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 A0A087WXM4 84 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 RAD51CO43502 376 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 NUDT14O95848 222 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 LDLRP01130 860 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 ITGA3P26006 1051 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 SCTRP47872 440 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 NRG3P56975 720 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 SCAIQ8N9R8 606 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 SHCBP1LQ9BZQ2 653 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 HS6ST1O60243 411 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 TPBGLP0DKB5 382 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 CCR4P51679 360 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 GALCP54803 685 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 HSF2Q03933 536 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 NECAB2Q7Z6G3 386 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 SYN2Q92777 582 aaPredicted RBP8.96□□□□□ -0.97
NIPBL-201ENST00000282516 NRDE2Q9H7Z3 1164 aa8.96□□□□□ -0.97
NIPBL-201ENST00000282516 CCDC162PA2VCL2 907 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 ZNF185O15231 689 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 IDH3BO43837 385 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 CPSF4O95639 269 aaKnown RBP8.96□□□□□ -0.98
NIPBL-201ENST00000282516 STIP1P31948 543 aaKnown RBP8.96□□□□□ -0.98
NIPBL-201ENST00000282516 OXCT1P55809 520 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 NR6A1Q15406 480 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 MYDGFQ969H8 173 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 TPD52L3Q96J77 140 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 PHTF1Q9UMS5 762 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 PCDHGA3Q9Y5H0 932 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 ECE2O60344 883 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 DHFR2Q86XF0 187 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 HPDLQ96IR7 371 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 ENTPD7Q9NQZ7 604 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.96□□□□□ -0.98
NIPBL-201ENST00000282516 HEY2Q9UBP5 337 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 A0A0B4J269 797 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 UBDO15205 165 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 SNX4O95219 450 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 PBLDP30039 288 aaPredicted RBP8.96□□□□□ -0.98
NIPBL-201ENST00000282516 MCAMP43121 646 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 GSTM5P46439 218 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 SPIRE1Q08AE8 756 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 TUBB3Q13509 450 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 KCNB2Q92953 911 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 Q96MT0 163 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 GSTK1Q9Y2Q3 226 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 CST8O60676 142 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 OR6A2O95222 327 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 CASP1P29466 404 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 AQP5P55064 265 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 BIKQ13323 160 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 QRICH1Q2TAL8 776 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 USP38Q8NB14 1042 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 C18orf25Q96B23 403 aaPredicted RBP8.96□□□□□ -0.98
NIPBL-201ENST00000282516 CCDC177Q9NQR7 707 aaPredicted RBP8.96□□□□□ -0.98
NIPBL-201ENST00000282516 CDC42BPBQ9Y5S2 1711 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms