RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ROR1Q01973 937 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 NOMO1Q15155 1222 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 KYAT1Q16773 422 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 SMTNL2Q2TAL5 461 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 CMPK2Q5EBM0 449 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 CELF3Q5SZQ8 465 aaKnown RBP13.43□□□□□ -0.26
C9orf3-201ENST00000277198 C4orf22Q6V702 233 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 CLNKQ7Z7G1 428 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 UNC45BQ8IWX7 931 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 ENDOVQ8N8Q3 282 aaKnown RBP13.43□□□□□ -0.26
C9orf3-201ENST00000277198 SPATA18Q8TC71 538 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 TMEM176AQ96HP8 235 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 CNPY3Q9BT09 278 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 TBC1D10AQ9BXI6 508 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 METTL5Q9NRN9 209 aaKnown RBP13.43□□□□□ -0.26
C9orf3-201ENST00000277198 DONSONQ9NYP3 566 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 SAE1Q9UBE0 346 aaPredicted RBP13.43□□□□□ -0.26
C9orf3-201ENST00000277198 NXF1Q9UBU9 619 aaKnown RBP13.43□□□□□ -0.26
C9orf3-201ENST00000277198 HAO1Q9UJM8 370 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 POLIQ9UNA4 740 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 MTO1Q9Y2Z2 717 aaKnown RBP13.43□□□□□ -0.26
C9orf3-201ENST00000277198 A8MUI8 341 aa13.42□□□□□ -0.26
C9orf3-201ENST00000277198 ZBTB42B2RXF5 422 aa13.42□□□□□ -0.26
C9orf3-201ENST00000277198 DIAPH2O60879 1101 aa13.42□□□□□ -0.26
C9orf3-201ENST00000277198 ERBB2P04626 1255 aa13.42□□□□□ -0.26
C9orf3-201ENST00000277198 RPSAP08865 295 aaKnown RBP13.42□□□□□ -0.26
C9orf3-201ENST00000277198 GSTA2P09210 222 aa13.42□□□□□ -0.26
C9orf3-201ENST00000277198 RAG1P15918 1043 aa13.42□□□□□ -0.26
C9orf3-201ENST00000277198 CYP2C18P33260 490 aa13.42□□□□□ -0.26
C9orf3-201ENST00000277198 ZNF200P98182 395 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-201ENST00000277198 BBS9Q3SYG4 887 aa13.42□□□□□ -0.26
C9orf3-201ENST00000277198 SCARA5Q6ZMJ2 495 aa13.42□□□□□ -0.26
C9orf3-201ENST00000277198 MAP7D3Q8IWC1 876 aa13.42□□□□□ -0.26
C9orf3-201ENST00000277198 DHX37Q8IY37 1157 aaKnown RBP13.42□□□□□ -0.26
C9orf3-201ENST00000277198 FAM71DQ8N9W8 422 aa13.42□□□□□ -0.26
C9orf3-201ENST00000277198 STK32AQ8WU08 396 aa13.42□□□□□ -0.26
C9orf3-201ENST00000277198 RTP4Q96DX8 246 aa13.42□□□□□ -0.26
C9orf3-201ENST00000277198 THOC1Q96FV9 657 aaKnown RBP13.42□□□□□ -0.26
C9orf3-201ENST00000277198 APOPT1Q96IL0 206 aa13.42□□□□□ -0.26
C9orf3-201ENST00000277198 SPATA33Q96N06 139 aa13.42□□□□□ -0.26
C9orf3-201ENST00000277198 GPR20Q99678 358 aa13.42□□□□□ -0.26
C9orf3-201ENST00000277198 ASB7Q9H672 318 aa13.42□□□□□ -0.26
C9orf3-201ENST00000277198 PAK5Q9P286 719 aa13.42□□□□□ -0.26
C9orf3-201ENST00000277198 ZNF180Q9UJW8 692 aa13.42□□□□□ -0.26
C9orf3-201ENST00000277198 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.42□□□□□ -0.26
C9orf3-201ENST00000277198 TEX264Q9Y6I9 313 aa13.42□□□□□ -0.26
C9orf3-201ENST00000277198 DOCK5Q9H7D0 1870 aa13.42□□□□□ -0.26
C9orf3-201ENST00000277198 TRDMT1O14717 391 aaKnown RBP13.41□□□□□ -0.26
C9orf3-201ENST00000277198 LPXNO60711 386 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 CCDC22O60826 627 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 BANF1O75531 89 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 INHBAP08476 426 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 FGFR1P11362 822 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 ETV4P43268 484 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 GPD2P43304 727 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 NEK3P51956 506 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 BASP1P80723 227 aaKnown RBP13.41□□□□□ -0.26
C9orf3-201ENST00000277198 KCNJ11Q14654 390 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 PDK2Q15119 407 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 FAM187BQ17R55 369 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 CTC1Q2NKJ3 1217 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 TAF1BQ53T94 588 aaPredicted RBP13.41□□□□□ -0.26
C9orf3-201ENST00000277198 ANKRD20A2Q5SQ80 823 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 LGSNQ5TDP6 509 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 ANKRD20A1Q5TYW2 823 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 ANKRD20A3Q5VUR7 823 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 FAM91A1Q658Y4 838 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 SH2D5Q6ZV89 423 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 TRIM42Q8IWZ5 723 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 TDHQ8IZJ6 230 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 FAM13CQ8NE31 585 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 PPTC7Q8NI37 304 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 EMID1Q96A84 441 aaPredicted RBP13.41□□□□□ -0.26
C9orf3-201ENST00000277198 PRMT7Q9NVM4 692 aaPredicted RBP13.41□□□□□ -0.26
C9orf3-201ENST00000277198 SIX4Q9UIU6 781 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 LRRC42Q9Y546 428 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 TCRBV9S1A1TA0A576 114 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 ZNF487B1APH4 448 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 MICAL2O94851 1124 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 STAU1O95793 577 aaKnown RBP13.41□□□□□ -0.26
C9orf3-201ENST00000277198 CD48P09326 243 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 GNAZP19086 355 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 MARK3P27448 753 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 MAGEA6P43360 314 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 GAD2Q05329 585 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 PTK7Q13308 1070 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 HIC1Q14526 733 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 EFTUD2Q15029 972 aaKnown RBP eCLIP13.41□□□□□ -0.26
C9orf3-201ENST00000277198 SHHQ15465 462 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 STILQ15468 1287 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 BOLA3Q53S33 107 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 TRIM50Q86XT4 487 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 C1orf127Q8N9H9 656 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 LRRC39Q96DD0 335 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 MRRFQ96E11 262 aaKnown RBP13.41□□□□□ -0.26
C9orf3-201ENST00000277198 ADPGKQ9BRR6 497 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 TSSK1BQ9BXA7 367 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 CDT1Q9H211 546 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 NPHS2Q9NP85 383 aa13.41□□□□□ -0.26
C9orf3-201ENST00000277198 TCRBV7S3A2A0A539 114 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms