RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 TSPAN14Q8NG11 270 aa9.51□□□□□ -0.89
HMGCLL1-201ENST00000274901 SLC35B2Q8TB61 432 aa9.51□□□□□ -0.89
HMGCLL1-201ENST00000274901 NKD2Q969F2 451 aaPredicted RBP9.51□□□□□ -0.89
HMGCLL1-201ENST00000274901 VTI1AQ96AJ9 217 aa9.51□□□□□ -0.89
HMGCLL1-201ENST00000274901 COX4I2Q96KJ9 171 aa9.51□□□□□ -0.89
HMGCLL1-201ENST00000274901 BIRC8Q96P09 236 aa9.51□□□□□ -0.89
HMGCLL1-201ENST00000274901 PKP2Q99959 881 aa9.51□□□□□ -0.89
HMGCLL1-201ENST00000274901 TRIM56Q9BRZ2 755 aaKnown RBP9.51□□□□□ -0.89
HMGCLL1-201ENST00000274901 DCUN1D5Q9BTE7 237 aa9.51□□□□□ -0.89
HMGCLL1-201ENST00000274901 XAB2Q9HCS7 855 aaKnown RBP9.51□□□□□ -0.89
HMGCLL1-201ENST00000274901 GPRC5CQ9NQ84 441 aa9.51□□□□□ -0.89
HMGCLL1-201ENST00000274901 SMYD2Q9NRG4 433 aa9.51□□□□□ -0.89
HMGCLL1-201ENST00000274901 XPO7Q9UIA9 1087 aaKnown RBP9.51□□□□□ -0.89
HMGCLL1-201ENST00000274901 SERPINA10Q9UK55 444 aa9.51□□□□□ -0.89
HMGCLL1-201ENST00000274901 DRG1Q9Y295 367 aaKnown RBP9.51□□□□□ -0.89
HMGCLL1-201ENST00000274901 FAM32AQ9Y421 112 aaKnown RBP9.51□□□□□ -0.89
HMGCLL1-201ENST00000274901 IGLV3-22A0A075B6J6 115 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 C7orf72A4D263 438 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 K7EPI3 171 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 ITGAVP06756 1048 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 INHBAP08476 426 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 ZNF23P17027 643 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 ITGA7Q13683 1181 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 BCL2A1Q16548 175 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 DCLRE1AQ6PJP8 1040 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 OTOP1Q7RTM1 612 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 CROCCP3Q8IVE0 287 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 XXYLT1Q8NBI6 393 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 DDI1Q8WTU0 396 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 FAM81BQ96LP2 452 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 FAM20AQ96MK3 541 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 NLRP4Q96MN2 994 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 SH2D3AQ9BRG2 576 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 HERC5Q9UII4 1024 aaKnown RBP9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 ITGA11Q9UKX5 1188 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 DNAJC16Q9Y2G8 782 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 TMED5Q9Y3A6 229 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 TNS1Q9HBL0 1735 aaKnown RBP9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 HMX2A2RU54 273 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 F8VP50 259 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 PLOD2O00469 737 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 LSM1O15116 133 aaKnown RBP9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 TLR3O15455 904 aaKnown RBP9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 OXSR1O95747 527 aaPredicted RBP9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 WEE2P0C1S8 567 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 SREBF1P36956 1147 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 BCAP31P51572 246 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 KPNA1P52294 538 aaPredicted RBP9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 OGDHQ02218 1023 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 PICALMQ13492 652 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 ATG16L1Q676U5 607 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 NANOGP8Q6NSW7 305 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 TRIM72Q6ZMU5 477 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 CCDC80Q76M96 950 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 ZBTB46Q86UZ6 589 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 UNC45BQ8IWX7 931 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 CHERPQ8IWX8 916 aaKnown RBP9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 PPM1NQ8N819 430 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 GFM2Q969S9 779 aaKnown RBP9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 COA1Q9GZY4 146 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 Q9H521 79 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 PNPOQ9NVS9 261 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 TRNAU1APQ9NX07 287 aaKnown RBP9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 C6orf203Q9P0P8 240 aaPredicted RBP9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 SEL1LQ9UBV2 794 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 TTLL3Q9Y4R7 772 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 TRIM17Q9Y577 477 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 CROCCQ5TZA2 2017 aa9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 COL11A2P13942 1736 aaPredicted RBP9.5□□□□□ -0.89
HMGCLL1-201ENST00000274901 ZBTB14O43829 449 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 BPGMP07738 259 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 XRCC1P18887 633 aaPredicted RBP9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 CD247P20963 164 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 NSFP46459 744 aaKnown RBP9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 IDH3AP50213 366 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 GPC3P51654 580 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 YWHAGP61981 247 aaKnown RBP eCLIP9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 GABPAQ06546 454 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 PDAP1Q13442 181 aaKnown RBP9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 TEDDM1Q5T9Z0 273 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 ARMCX6Q7L4S7 300 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 RCOR2Q8IZ40 523 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 SLC7A5P1Q8MH63 180 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 CENPSQ8N2Z9 138 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 KBTBD7Q8WVZ9 684 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 CFAP36Q96G28 342 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 VPS50Q96JG6 964 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 KLC2Q9H0B6 622 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 RAB20Q9NX57 234 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 DAGLAQ9Y4D2 1042 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 ZNF536O15090 1300 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 FOCADQ5VW36 1801 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 MATN2O00339 956 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 NDUFB5O43674 189 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 TOM1L1O75674 476 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 CDKN2BP42772 138 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 THOP1P52888 689 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 MS4A2Q01362 244 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 OTUD4Q01804 1114 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms