RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 AFG3L2Q9Y4W6 797 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 SFI1A8K8P3 1242 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 PSMD12O00232 456 aaPredicted RBP16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 FOSP01100 380 aaPredicted RBP16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 NR3C1P04150 777 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 TRIM49P0CI25 452 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 TRIM49CP0CI26 452 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 NR4A1P22736 598 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 PGM2L1Q6PCE3 622 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 CLVS1Q8IUQ0 354 aaPredicted RBP16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 C12orf43Q96C57 262 aaKnown RBP16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 C20orf27Q9GZN8 174 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 C1orf21Q9H246 121 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 Q9H521 79 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 IGSF9Q9P2J2 1179 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 RNF11Q9Y3C5 154 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 ASTN1O14525 1302 aa16.27■□□□□ 0.2
CTDSP1-201ENST00000273062 KRBA1A5PL33 1030 aa16.27■□□□□ 0.2
CTDSP1-201ENST00000273062 LPXNO60711 386 aa16.27■□□□□ 0.2
CTDSP1-201ENST00000273062 ZC3H11AO75152 810 aaKnown RBP eCLIP16.27■□□□□ 0.24e-6■■■■□ 25.6
CTDSP1-201ENST00000273062 ZMPSTE24O75844 475 aa16.27■□□□□ 0.2
CTDSP1-201ENST00000273062 SULT1C4O75897 302 aa16.27■□□□□ 0.2
CTDSP1-201ENST00000273062 DHRS4L1P0CG22 281 aa16.27■□□□□ 0.2
CTDSP1-201ENST00000273062 RPA1P27694 616 aa16.27■□□□□ 0.2
CTDSP1-201ENST00000273062 CCT8P50990 548 aa16.27■□□□□ 0.2
CTDSP1-201ENST00000273062 CREB5Q02930 508 aa16.27■□□□□ 0.2
CTDSP1-201ENST00000273062 ALCAMQ13740 583 aa16.27■□□□□ 0.2
CTDSP1-201ENST00000273062 SEPT6Q14141 434 aa16.27■□□□□ 0.2
CTDSP1-201ENST00000273062 KNOP1Q1ED39 458 aaKnown RBP16.27■□□□□ 0.2
CTDSP1-201ENST00000273062 ZNF829Q3KNS6 432 aaPredicted RBP16.27■□□□□ 0.2
CTDSP1-201ENST00000273062 PPP2R2DQ66LE6 453 aa16.27■□□□□ 0.2
CTDSP1-201ENST00000273062 GET4Q7L5D6 327 aaPredicted RBP16.27■□□□□ 0.2
CTDSP1-201ENST00000273062 TBC1D15Q8TC07 691 aa16.27■□□□□ 0.2
CTDSP1-201ENST00000273062 PTCD2Q8WV60 388 aaKnown RBP16.27■□□□□ 0.2
CTDSP1-201ENST00000273062 EME1Q96AY2 570 aa16.27■□□□□ 0.2
CTDSP1-201ENST00000273062 ANKRD36BP1Q96IX9 119 aa16.27■□□□□ 0.2
CTDSP1-201ENST00000273062 EIF2AK1Q9BQI3 630 aaKnown RBP16.27■□□□□ 0.2
CTDSP1-201ENST00000273062 KCNK4Q9NYG8 393 aa16.27■□□□□ 0.2
CTDSP1-201ENST00000273062 PRELID1Q9Y255 219 aa16.27■□□□□ 0.2
CTDSP1-201ENST00000273062 TM9SF1O15321 606 aa16.27■□□□□ 0.19
CTDSP1-201ENST00000273062 KLRC2P26717 231 aa16.27■□□□□ 0.19
CTDSP1-201ENST00000273062 GABRB3P28472 473 aa16.27■□□□□ 0.19
CTDSP1-201ENST00000273062 REM2Q8IYK8 340 aaPredicted RBP16.27■□□□□ 0.19
CTDSP1-201ENST00000273062 SERAC1Q96JX3 654 aa16.27■□□□□ 0.19
CTDSP1-201ENST00000273062 SPATA17Q96L03 361 aa16.27■□□□□ 0.19
CTDSP1-201ENST00000273062 RILPQ96NA2 401 aa16.27■□□□□ 0.19
CTDSP1-201ENST00000273062 PAFAH2Q99487 392 aa16.27■□□□□ 0.19
CTDSP1-201ENST00000273062 ZNF341Q9BYN7 854 aa16.27■□□□□ 0.19
CTDSP1-201ENST00000273062 DNM3Q9UQ16 869 aa16.27■□□□□ 0.19
CTDSP1-201ENST00000273062 CLUHO75153 1309 aa16.27■□□□□ 0.19
CTDSP1-201ENST00000273062 CCDC162PA2VCL2 907 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 UNCXA6NJT0 531 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 TBX3O15119 743 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 FBXO21O94952 628 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 INHBBP09529 407 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 PSMC1P62191 440 aaKnown RBP16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 NR1D2Q14995 579 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 PPP4R3CPQ6ZMV5 832 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 CDHR3Q6ZTQ4 885 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 GPR180Q86V85 440 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 LILRA2Q8N149 483 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 MYOZ2Q9NPC6 264 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 PKD2L1Q9P0L9 805 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 PCDHGA3Q9Y5H0 932 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 TRIM64CA6NLI5 447 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 HMOX2P30519 316 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 BST1Q10588 318 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 E2F2Q14209 437 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 EFHC2Q5JST6 749 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 SYDE1Q6ZW31 735 aaPredicted RBP16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 DEFB107AQ8IZN7 70 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 GRK7Q8WTQ7 553 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 FAM20AQ96MK3 541 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 SLC2A11Q9BYW1 496 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 WRAP73Q9P2S5 460 aaPredicted RBP16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 RABGEF1Q9UJ41 708 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 STRIP2Q9ULQ0 834 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 TLL2Q9Y6L7 1015 aa16.26■□□□□ 0.19
CTDSP1-201ENST00000273062 DENND3A2RUS2 1198 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 BAIAP3O94812 1187 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 CYP3A4P08684 503 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 RALAP11233 206 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 BNIP3Q12983 259 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 GSTA5Q7RTV2 222 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 LDHDQ86WU2 507 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 TPH2Q8IWU9 490 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 CCDC89Q8N998 374 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 JADE3Q92613 823 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 TANKQ92844 425 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 HPS1Q92902 700 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 TAMM41Q96BW9 452 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 ZBED3Q96IU2 234 aaPredicted RBP16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 SSU72Q9NP77 194 aaKnown RBP16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 CNTN3Q9P232 1028 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 POLIQ9UNA4 740 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 CARD8Q9Y2G2 431 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 A0A1W2PPW3 197 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 IQCA1LA6NCM1 817 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 SIN3BO75182 1162 aa16.25■□□□□ 0.19
CTDSP1-201ENST00000273062 ARP10275 920 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms