RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 SYAP1Q96A49 352 aaPredicted RBP9.48□□□□□ -0.89
TPM3-201ENST00000271850 ERLEC1Q96DZ1 483 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 SLITRK1Q96PX8 696 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 KLF16Q9BXK1 252 aaPredicted RBP9.48□□□□□ -0.89
TPM3-201ENST00000271850 LRRC27Q9C0I9 530 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 SLC6A17Q9H1V8 727 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 MAGEF1Q9HAY2 307 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 DMAP1Q9NPF5 467 aaPredicted RBP9.48□□□□□ -0.89
TPM3-201ENST00000271850 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.48□□□□□ -0.898e-7■■■■■ 194.6
TPM3-201ENST00000271850 SPHK2Q9NRA0 654 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 EVLQ9UI08 416 aaPredicted RBP9.48□□□□□ -0.89
TPM3-201ENST00000271850 PCNX2A6NKB5 2137 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 ADAMTS9Q9P2N4 1935 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 PRRT4C9JH25 899 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 SLC9A3R1O14745 358 aaPredicted RBP9.47□□□□□ -0.89
TPM3-201ENST00000271850 KHNYNO15037 678 aaKnown RBP9.47□□□□□ -0.89
TPM3-201ENST00000271850 CYP26A1O43174 497 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 RTN3O95197 1032 aaPredicted RBP9.47□□□□□ -0.89
TPM3-201ENST00000271850 ADH1CP00326 375 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 ASS1P00966 412 aaKnown RBP9.47□□□□□ -0.89
TPM3-201ENST00000271850 APODP05090 189 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 CISD3P0C7P0 127 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 ZSCAN22P10073 491 aaPredicted RBP9.47□□□□□ -0.89
TPM3-201ENST00000271850 IRF1P10914 325 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 ITPKAP23677 461 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 WASP42768 502 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 TNFRSF4P43489 277 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 DHPSP49366 369 aaPredicted RBP9.47□□□□□ -0.89
TPM3-201ENST00000271850 MAP3K7CLP57077 242 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 AMPD3Q01432 767 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 DNM1Q05193 864 aaKnown RBP9.47□□□□□ -0.89
TPM3-201ENST00000271850 ZNF252P-AS1Q0IIN9 211 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 BIRC3Q13489 604 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 TRPC3Q13507 836 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 TRIM61Q5EBN2 209 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 ZNF667Q5HYK9 610 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 CLEC20AQ6ZU45 233 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 SV2AQ7L0J3 742 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 TTC30AQ86WT1 665 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 SLC41A1Q8IVJ1 513 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 CRYBG2Q8N1P7 616 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 DEFB119Q8N690 84 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 TERB1Q8NA31 727 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 DEFB124Q8NES8 71 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 SNX21Q969T3 373 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 EXOC4Q96A65 974 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 SMARCD1Q96GM5 515 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 PAGE5Q96GU1 130 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 ZNF396Q96N95 335 aaPredicted RBP9.47□□□□□ -0.89
TPM3-201ENST00000271850 TMEM9BQ9NQ34 198 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 FAM49BQ9NUQ9 324 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 PILRBQ9UKJ0 227 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 NUDT5Q9UKK9 219 aa9.47□□□□□ -0.89
TPM3-201ENST00000271850 R3HCC1Q9Y3T6 440 aaKnown RBP9.47□□□□□ -0.89
TPM3-201ENST00000271850 LOC400499M0QZD8 3231 aa9.46□□□□□ -0.89
TPM3-201ENST00000271850 IGHV1OR15-9A0A0B4J2B8 117 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 CACNG3O60359 315 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 TLR5O60602 858 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 HLA-DRAP01903 254 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 CENPBP07199 599 aaPredicted RBP9.46□□□□□ -0.9
TPM3-201ENST00000271850 PROS1P07225 676 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 SLFN14P0C7P3 912 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 ENGP17813 658 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 NDUFV2P19404 249 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 CSRP1P21291 193 aaKnown RBP9.46□□□□□ -0.9
TPM3-201ENST00000271850 FAM193AP78312 1265 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 GAD2Q05329 585 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 PPP3CAQ08209 521 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 INCA1Q0VD86 236 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 HSF5Q4G112 596 aaPredicted RBP9.46□□□□□ -0.9
TPM3-201ENST00000271850 HTR3DQ70Z44 454 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 SCD5Q86SK9 330 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 PIP4P1Q86T03 277 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 DDX42Q86XP3 938 aaKnown RBP eCLIP9.46□□□□□ -0.9
TPM3-201ENST00000271850 ZNF513Q8N8E2 541 aaPredicted RBP9.46□□□□□ -0.9
TPM3-201ENST00000271850 PDZD8Q8NEN9 1154 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 OR2I1PQ8NGU4 316 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 GATA6Q92908 595 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 OTUB2Q96DC9 234 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 MED10Q9BTT4 135 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 CAPN10Q9HC96 672 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 CYLDQ9NQC7 956 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 EHD2Q9NZN4 543 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 MARK1Q9P0L2 795 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 CALCOCO1Q9P1Z2 691 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 TBC1D14Q9P2M4 693 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 CGNQ9P2M7 1197 aaKnown RBP9.46□□□□□ -0.9
TPM3-201ENST00000271850 RCOR1Q9UKL0 485 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 HPSEQ9Y251 543 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 ZDHHC9Q9Y397 364 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 STARD13Q9Y3M8 1113 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 RAD54BQ9Y620 910 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 FAM208BQ5VWN6 2430 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 CEP192Q8TEP8 1941 aa9.46□□□□□ -0.9
TPM3-201ENST00000271850 A0A1B0GVL5 298 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 A0A1W2PQH9 124 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 TBC1D3BA6NDS4 549 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 RCCD1A6NED2 376 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 WASH3PC4AMC7 463 aa9.45□□□□□ -0.9
TPM3-201ENST00000271850 NEDD8-MDP1E9PL57 170 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms