RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 SLX1AQ9BQ83 275 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 TMEM134Q9H6X4 195 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 DNPEPQ9ULA0 475 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 MYADML2A6NDP7 307 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 FCHO1O14526 889 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 CA12O43570 354 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 PGK1P00558 417 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 YY1P25490 414 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 ARL4CP56559 192 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 HPCAP84074 193 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 PLOD1Q02809 727 aaPredicted RBP16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 DUSP28Q4G0W2 176 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 MDH1BQ5I0G3 518 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 RIPOR1Q6ZS17 1223 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 ALYREFQ86V81 257 aaKnown RBP16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 TMEM192Q8IY95 271 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 ACO2Q99798 780 aaKnown RBP16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 CCDC28BQ9BUN5 200 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 MRPL4Q9BYD3 311 aaKnown RBP16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 FOXP3Q9BZS1 431 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 NMUR2Q9GZQ4 415 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 SMARCAD1Q9H4L7 1026 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 MINDY3Q9H8M7 445 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 CIDEBQ9UHD4 219 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 ZNF148Q9UQR1 794 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 MTO1Q9Y2Z2 717 aaKnown RBP16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 TOM1L1O75674 476 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 DLDP09622 509 aaKnown RBP16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 MYL2P10916 166 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 EIF4BP23588 611 aaKnown RBP16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 TM4SF4P48230 202 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 GEMIN4P57678 1058 aaKnown RBP16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 GPX6P59796 221 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 LAMC2Q13753 1193 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 KRT72Q14CN4 511 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 EEF1DP3Q658K8 133 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 NME8Q8N427 588 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 TRPV1Q8NER1 839 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 TRIB2Q92519 343 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 EBF3Q9H4W6 596 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 SLC24A2Q9UI40 661 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 SUPT3HO75486 399 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 IQCF3P0C7M6 154 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 ZNF865P0CJ78 1059 aaPredicted RBP16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 KRT10P13645 584 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 SSTR1P30872 391 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 NOMO3P69849 1222 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 CDC16Q13042 620 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 TMED1Q13445 227 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 MTM1Q13496 603 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 IER5Q5VY09 327 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 MON1BQ7L1V2 547 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 HOMEZQ8IX15 550 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 ARHGAP24Q8N264 748 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 SLC25A41Q8N5S1 370 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 CCDC110Q8TBZ0 833 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 ZNF606Q8WXB4 792 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 OXNAD1Q96HP4 312 aaPredicted RBP16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 PANX3Q96QZ0 392 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 FAM49AQ9H0Q0 323 aaPredicted RBP16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 RNF186Q9NXI6 227 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 NDE1Q9NXR1 346 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 ERAP1Q9NZ08 941 aa16.55■□□□□ 0.24
MAP1LC3B-201ENST00000268607 FAM237BA0A1B0GVD1 139 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 PI4K2BG5E9Z4 385 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 ALOX15BO15296 676 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 FAM189A1O60320 539 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 ENO1P06733 434 aaKnown RBP16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 MMP3P08254 477 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 RAP1GDS1P52306 607 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 TFDP1Q14186 410 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 HIC1Q14526 733 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 RASA2Q15283 850 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 ATP13A4Q4VNC1 1196 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 TLK2Q86UE8 772 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 BRSK2Q8IWQ3 736 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 RNF168Q8IYW5 571 aaPredicted RBP16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 LZICQ8WZA0 190 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 IMPG2Q9BZV3 1241 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 MAF1Q9H063 256 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 VPS11Q9H270 941 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 IL1RAPL1Q9NZN1 696 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 PPM1HQ9ULR3 514 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 RBM47A0AV96 593 aaKnown RBP16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 MAGEB3O15480 346 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 CRABP2P29373 138 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 SH3BGRP55822 239 aaPredicted RBP16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 RPL7AP62424 266 aaKnown RBP16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 GAD2Q05329 585 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 ORC1Q13415 861 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 LRRC36Q1X8D7 754 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 SCUBE1Q8IWY4 988 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 RBM15BQ8NDT2 890 aaKnown RBP16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 PPTC7Q8NI37 304 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 RNF19AQ9NV58 838 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 NXF1Q9UBU9 619 aaKnown RBP16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 RABGEF1Q9UJ41 708 aa16.54■□□□□ 0.24
MAP1LC3B-201ENST00000268607 TMEM221A6NGB7 291 aa16.53■□□□□ 0.24
MAP1LC3B-201ENST00000268607 TCF4P15884 667 aa16.53■□□□□ 0.24
MAP1LC3B-201ENST00000268607 BGNP21810 368 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms