RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 SLC26A11Q86WA9 606 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 SHC3Q92529 594 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 MTBPQ96DY7 904 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 PAFAH2Q99487 392 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 UBP1Q9NZI7 540 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 XRN1Q8IZH2 1706 aaKnown RBP15.9■□□□□ 0.14
TIMP3-201ENST00000266085 CCT8L1PA6NM43 557 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 IL10P22301 178 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 NCKAP1LP55160 1127 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 MRPS6P82932 125 aaKnown RBP15.9■□□□□ 0.14
TIMP3-201ENST00000266085 PTK2BQ14289 1009 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 ACAP1Q15027 740 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 RARS2Q5T160 578 aaKnown RBP15.9■□□□□ 0.14
TIMP3-201ENST00000266085 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.9■□□□□ 0.14
TIMP3-201ENST00000266085 MRPL9Q9BYD2 267 aaKnown RBP15.9■□□□□ 0.14
TIMP3-201ENST00000266085 GANQ9H2C0 597 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 BTBD7Q9P203 1132 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 DNAJC8O75937 253 aaPredicted RBP15.9■□□□□ 0.14
TIMP3-201ENST00000266085 ERFP50548 548 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 CARNMT1Q8N4J0 409 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 PCYOX1LQ8NBM8 494 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 ULBP1Q9BZM6 244 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 TMBIM4Q9HC24 238 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 RBM22Q9NW64 420 aaKnown RBP eCLIP15.9■□□□□ 0.14
TIMP3-201ENST00000266085 SNCAIPQ9Y6H5 919 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 LMO7Q8WWI1 1683 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 TTLL13PA6NNM8 815 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 RHOCP08134 193 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 CNGA2Q16280 664 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 AGAP9Q5VTM2 703 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 DENND1BQ6P3S1 775 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 FAM71AQ8IYT1 594 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 GPR20Q99678 358 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 CEP41Q9BYV8 373 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 SLC24A2Q9UI40 661 aa15.9■□□□□ 0.14
TIMP3-201ENST00000266085 B2RBV5 119 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 AMPD1P23109 780 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 YWHAQP27348 245 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 SLC39A12Q504Y0 691 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 FOXR2Q6PJQ5 311 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 TFAP2DQ7Z6R9 452 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 CREG2Q8IUH2 290 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 FGFBP2Q9BYJ0 223 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 NUDT5Q9UKK9 219 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 ONECUT3O60422 494 aaPredicted RBP15.89■□□□□ 0.13
TIMP3-201ENST00000266085 TBX4P57082 545 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 LRRC34Q8IZ02 419 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 COLGALT1Q8NBJ5 622 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 BAP1Q92560 729 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 TMA16Q96EY4 203 aaKnown RBP15.89■□□□□ 0.13
TIMP3-201ENST00000266085 RUBCNLQ9H714 662 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 CDYLQ9Y232 598 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 PHLPP1O60346 1717 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 LOC100653049A0A140TA62 436 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 CBX4O00257 560 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 KRT34O76011 436 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 MYL4P12829 197 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 DDX5P17844 614 aaKnown RBP15.89■□□□□ 0.13
TIMP3-201ENST00000266085 PTPN1P18031 435 aaKnown RBP15.89■□□□□ 0.13
TIMP3-201ENST00000266085 ARF4P18085 180 aaPredicted RBP15.89■□□□□ 0.13
TIMP3-201ENST00000266085 KPNA1P52294 538 aaPredicted RBP15.89■□□□□ 0.13
TIMP3-201ENST00000266085 TTLL9Q3SXZ7 439 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.89■□□□□ 0.13
TIMP3-201ENST00000266085 UNC93AQ86WB7 457 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 HS6ST3Q8IZP7 471 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 TMEM86AQ8N2M4 240 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 UBE2OQ9C0C9 1292 aaKnown RBP15.89■□□□□ 0.13
TIMP3-201ENST00000266085 NT5MQ9NPB1 228 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 RAB21Q9UL25 225 aa15.89■□□□□ 0.13
TIMP3-201ENST00000266085 KCNK1O00180 336 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 ICA1LQ8NDH6 482 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 ILKAPQ9H0C8 392 aaPredicted RBP15.88■□□□□ 0.13
TIMP3-201ENST00000266085 ST3GAL5Q9UNP4 418 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 AIM2O14862 343 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 LTFP02788 710 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 USP17L7P0C7H9 530 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 IRF2BP1Q8IU81 584 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 HDAC7Q8WUI4 952 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 THTPAQ9BU02 230 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 APOL5Q9BWW9 433 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 UBXN6Q9BZV1 441 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 DCDC2Q9UHG0 476 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 SLIT2O94813 1529 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 PRPF4O43172 522 aaKnown RBP eCLIP15.88■□□□□ 0.13
TIMP3-201ENST00000266085 SOAT2O75908 522 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 POLE2P56282 527 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 SETD3Q86TU7 594 aaPredicted RBP15.88■□□□□ 0.13
TIMP3-201ENST00000266085 IFNEQ86WN2 208 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 MYCBPAPQ8TBZ2 947 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 CHST12Q9NRB3 414 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 TRMT6Q9UJA5 497 aaKnown RBP15.88■□□□□ 0.13
TIMP3-201ENST00000266085 AURKCQ9UQB9 309 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 DLG5Q8TDM6 1919 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 STMN1P16949 149 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 PTPN7P35236 360 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 HDAC4P56524 1084 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 EFL1Q7Z2Z2 1120 aaKnown RBP15.88■□□□□ 0.13
TIMP3-201ENST00000266085 PPTC7Q8NI37 304 aa15.88■□□□□ 0.13
TIMP3-201ENST00000266085 DNALI1O14645 258 aaPredicted RBP15.87■□□□□ 0.13
TIMP3-201ENST00000266085 CD52P31358 61 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms