RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 DNAJB4Q9UDY4 337 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 PHTF1Q9UMS5 762 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 GIT1Q9Y2X7 761 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 ACTL7BQ9Y614 415 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 PMM2O15305 246 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 TP73O15350 636 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 ECEL1O95672 775 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 TIMP1P01033 207 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 ITGB1P05556 798 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 KCNE1P15382 129 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 WDR4P57081 412 aaKnown RBP13.15□□□□□ -0.3
PRPF6-201ENST00000266079 OCRLQ01968 901 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 MRPL10Q7Z7H8 261 aaKnown RBP13.15□□□□□ -0.3
PRPF6-201ENST00000266079 SLC13A5Q86YT5 568 aaPredicted RBP13.15□□□□□ -0.3
PRPF6-201ENST00000266079 FAM81AQ8TBF8 368 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 SHC3Q92529 594 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 BADQ92934 168 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 FTHL17Q9BXU8 183 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 PDE4DIPQ5VU43 2346 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 MYO7AQ13402 2215 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 TMEM110-MUSTN1A8MSY1 372 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 ZC3H11AO75152 810 aaKnown RBP eCLIP13.15□□□□□ -0.3
PRPF6-201ENST00000266079 CD19P15391 556 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 PTPN4P29074 926 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 DEFB103AP81534 67 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 GCNT1Q02742 428 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 ADCY1Q08828 1119 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 CCDC6Q16204 474 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 SPDYAQ5MJ70 313 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 DTNBP1Q96EV8 351 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 TWNKQ96RR1 684 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 CHORDC1Q9UHD1 332 aaPredicted RBP13.15□□□□□ -0.3
PRPF6-201ENST00000266079 TBK1Q9UHD2 729 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 NAALADL1Q9UQQ1 740 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 MYO9BQ13459 2157 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 DDHD2O94830 711 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 CBX6O95503 412 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 CFHP08603 1231 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 PDGFRBP09619 1106 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 PYGMP11217 842 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 BRCC3P46736 316 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 OR1G1P47890 313 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 MCCD1P59942 119 aaPredicted RBP13.15□□□□□ -0.3
PRPF6-201ENST00000266079 IKBKEQ14164 716 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 SIX1Q15475 284 aaPredicted RBP13.15□□□□□ -0.3
PRPF6-201ENST00000266079 CCDC142Q17RM4 750 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 KHDC1Q4VXA5 237 aaKnown RBP13.15□□□□□ -0.3
PRPF6-201ENST00000266079 LRRC23Q53EV4 343 aaPredicted RBP13.15□□□□□ -0.3
PRPF6-201ENST00000266079 C2CD6Q53TS8 623 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 SNX30Q5VWJ9 437 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 NOP9Q86U38 636 aaKnown RBP13.15□□□□□ -0.3
PRPF6-201ENST00000266079 C12orf50Q8NA57 414 aaPredicted RBP13.15□□□□□ -0.3
PRPF6-201ENST00000266079 MAIP1Q8WWC4 291 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 DPF3Q92784 378 aa13.15□□□□□ -0.3
PRPF6-201ENST00000266079 TBKBP1A7MCY6 615 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 CDH16O75309 829 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 CSPG5O95196 566 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 ACO1P21399 889 aaKnown RBP13.14□□□□□ -0.31
PRPF6-201ENST00000266079 RANBP1P43487 201 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 CACNA2D1P54289 1103 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 SESN3P58005 492 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 DNAJC3Q13217 504 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 ARMC3Q5W041 872 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 C4orf50Q6ZRC1 276 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 PHLDB2Q86SQ0 1253 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 PAIP2Q9BPZ3 127 aaKnown RBP13.14□□□□□ -0.31
PRPF6-201ENST00000266079 MRPL45Q9BRJ2 306 aaKnown RBP13.14□□□□□ -0.31
PRPF6-201ENST00000266079 MAGEA13PA6NCF6 341 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 FAM47DPA6NHR8 397 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 KPNA7A9QM74 516 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 THAP12O43422 761 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 XPOTO43592 962 aaKnown RBP13.14□□□□□ -0.31
PRPF6-201ENST00000266079 ITIH2P19823 946 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 LILRA4P59901 499 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 ENPEPQ07075 957 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 TCEAL1Q15170 157 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 XKR4Q5GH76 650 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 NOMO2Q5JPE7 1267 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 FAM71AQ8IYT1 594 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 OR6B3Q8NGW1 331 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 SCG3Q8WXD2 468 aaKnown RBP13.14□□□□□ -0.31
PRPF6-201ENST00000266079 FAM192AQ9GZU8 254 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 TBC1D13Q9NVG8 400 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 NINJ2Q9NZG7 142 aa13.14□□□□□ -0.31
PRPF6-201ENST00000266079 TTC3P53804 2025 aa13.13□□□□□ -0.31
PRPF6-201ENST00000266079 ASMTLO95671 621 aa13.13□□□□□ -0.31
PRPF6-201ENST00000266079 COMTP21964 271 aa13.13□□□□□ -0.31
PRPF6-201ENST00000266079 UBE2Q1Q7Z7E8 422 aa13.13□□□□□ -0.31
PRPF6-201ENST00000266079 SDCCAG8Q86SQ7 713 aaPredicted RBP13.13□□□□□ -0.31
PRPF6-201ENST00000266079 ATL2Q8NHH9 583 aa13.13□□□□□ -0.31
PRPF6-201ENST00000266079 SLCO2A1Q92959 643 aa13.13□□□□□ -0.31
PRPF6-201ENST00000266079 LRRC19Q9H756 370 aa13.13□□□□□ -0.31
PRPF6-201ENST00000266079 DMAP1Q9NPF5 467 aaPredicted RBP13.13□□□□□ -0.31
PRPF6-201ENST00000266079 TMEM161AQ9NX61 479 aa13.13□□□□□ -0.31
PRPF6-201ENST00000266079 LNPEPQ9UIQ6 1025 aa13.13□□□□□ -0.31
PRPF6-201ENST00000266079 PDLIM1O00151 329 aa13.13□□□□□ -0.31
PRPF6-201ENST00000266079 SMAPO00193 183 aa13.13□□□□□ -0.31
PRPF6-201ENST00000266079 TJP3O95049 919 aa13.13□□□□□ -0.31
PRPF6-201ENST00000266079 CXCL10P02778 98 aa13.13□□□□□ -0.31
PRPF6-201ENST00000266079 CYP11B1P15538 503 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms