RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 RBM41Q96IZ5 413 aaKnown RBP23.65■■□□□ 1.38
UFD1-201ENST00000263202 NKX2-4Q9H2Z4 354 aa23.65■■□□□ 1.38
UFD1-201ENST00000263202 MAGED2Q9UNF1 606 aaPredicted RBP23.65■■□□□ 1.38
UFD1-201ENST00000263202 PI4K2BG5E9Z4 385 aa23.64■■□□□ 1.38
UFD1-201ENST00000263202 CSH1P0DML2 217 aa23.64■■□□□ 1.38
UFD1-201ENST00000263202 CSH2P0DML3 217 aa23.64■■□□□ 1.38
UFD1-201ENST00000263202 BMP8BP34820 402 aa23.64■■□□□ 1.38
UFD1-201ENST00000263202 TWF1Q12792 350 aa23.64■■□□□ 1.38
UFD1-201ENST00000263202 NME3Q13232 169 aa23.64■■□□□ 1.38
UFD1-201ENST00000263202 GPM6BQ13491 265 aa23.64■■□□□ 1.38
UFD1-201ENST00000263202 CMASQ8NFW8 434 aaPredicted RBP23.64■■□□□ 1.38
UFD1-201ENST00000263202 MICAL1Q8TDZ2 1067 aa23.64■■□□□ 1.38
UFD1-201ENST00000263202 DQX1Q8TE96 717 aaKnown RBP23.64■■□□□ 1.38
UFD1-201ENST00000263202 SLITRK1Q96PX8 696 aa23.64■■□□□ 1.38
UFD1-201ENST00000263202 TLR8Q9NR97 1041 aaKnown RBP23.64■■□□□ 1.38
UFD1-201ENST00000263202 PIGVQ9NUD9 493 aa23.64■■□□□ 1.38
UFD1-201ENST00000263202 MSRAQ9UJ68 235 aa23.64■■□□□ 1.38
UFD1-201ENST00000263202 FBXW11Q9UKB1 542 aa23.64■■□□□ 1.38
UFD1-201ENST00000263202 SYNJ2BP-COX16A0A087WUM0 186 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 HMGA1P17096 107 aaKnown RBP23.63■■□□□ 1.37
UFD1-201ENST00000263202 RAB30Q15771 203 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 LONRF2Q1L5Z9 754 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 BOLA3Q53S33 107 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 ANKS1BQ7Z6G8 1248 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 CCDC50Q8IVM0 306 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 SPATA4Q8NEY3 305 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 TEKT4Q8WW24 435 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 HSPH1Q92598 858 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 RPGRIP1Q96KN7 1286 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 SNRNP25Q9BV90 132 aaKnown RBP23.63■■□□□ 1.37
UFD1-201ENST00000263202 COX16Q9P0S2 106 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 C3orf70A6NLC5 250 aaPredicted RBP23.63■■□□□ 1.37
UFD1-201ENST00000263202 TADA3O75528 432 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 IGLV3-25P01717 112 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 ZDHHC11BP0C7U3 371 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 PSEN1P49768 467 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 ITIH3Q06033 890 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 CLUL1Q15846 466 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 TAC4Q86UU9 113 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 FAM131BQ86XD5 332 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 SLC13A5Q86YT5 568 aaPredicted RBP23.63■■□□□ 1.37
UFD1-201ENST00000263202 FAM204AQ9H8W3 233 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 CERS4Q9HA82 394 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 WDR6Q9NNW5 1121 aaKnown RBP23.63■■□□□ 1.37
UFD1-201ENST00000263202 DDIT4Q9NX09 232 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 CLIC5Q9NZA1 410 aa23.63■■□□□ 1.37
UFD1-201ENST00000263202 LRRD1A4D1F6 860 aa23.62■■□□□ 1.37
UFD1-201ENST00000263202 MDM4O15151 490 aa23.62■■□□□ 1.37
UFD1-201ENST00000263202 LPXNO60711 386 aa23.62■■□□□ 1.37
UFD1-201ENST00000263202 KDELR1P24390 212 aa23.62■■□□□ 1.37
UFD1-201ENST00000263202 COPS2P61201 443 aa23.62■■□□□ 1.37
UFD1-201ENST00000263202 VEPH1Q14D04 833 aa23.62■■□□□ 1.37
UFD1-201ENST00000263202 ODF2Q5BJF6 829 aa23.62■■□□□ 1.37
UFD1-201ENST00000263202 ERMARDQ5T6L9 678 aa23.62■■□□□ 1.37
UFD1-201ENST00000263202 MFSD7Q6UXD7 560 aa23.62■■□□□ 1.37
UFD1-201ENST00000263202 CCDC185Q8N715 623 aa23.62■■□□□ 1.37
UFD1-201ENST00000263202 MYRFLQ96LU7 910 aa23.62■■□□□ 1.37
UFD1-201ENST00000263202 NAP1L3Q99457 506 aaPredicted RBP23.62■■□□□ 1.37
UFD1-201ENST00000263202 SMOC2Q9H3U7 446 aa23.62■■□□□ 1.37
UFD1-201ENST00000263202 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.62■■□□□ 1.37
UFD1-201ENST00000263202 F9P00740 461 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 ARSEP51690 589 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 CLCN4P51793 760 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 EPHB3P54753 998 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 C2orf54Q08AI8 447 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 EIF4EBP2Q13542 120 aaPredicted RBP23.61■■□□□ 1.37
UFD1-201ENST00000263202 LLGL1Q15334 1064 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 PPP2R2DQ66LE6 453 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 PDE12Q6L8Q7 609 aaKnown RBP23.61■■□□□ 1.37
UFD1-201ENST00000263202 SPOCD1Q6ZMY3 1216 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 KREMEN2Q8NCW0 462 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 RNF139Q8WU17 664 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 CASP10Q92851 521 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 TRMT2BQ96GJ1 504 aaKnown RBP23.61■■□□□ 1.37
UFD1-201ENST00000263202 HERPUD2Q9BSE4 406 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.61■■□□□ 1.37
UFD1-201ENST00000263202 GPATCH2LQ9NWQ4 482 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.61■■□□□ 1.37
UFD1-201ENST00000263202 NUDT5Q9UKK9 219 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 OBSL1O75147 1896 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 ANAPC1Q9H1A4 1944 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 GLUD1P00367 558 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 RALAP11233 206 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 CDKN2BP42772 138 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 PLD1Q13393 1074 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 ZC3H12AQ5D1E8 599 aaKnown RBP23.61■■□□□ 1.37
UFD1-201ENST00000263202 MSANTD2Q6P1R3 559 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 CCDC149Q6ZUS6 474 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 ADAT2Q7Z6V5 191 aaKnown RBP23.61■■□□□ 1.37
UFD1-201ENST00000263202 KCTD6Q8NC69 237 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 OVCA2Q8WZ82 227 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 AP1M1Q9BXS5 423 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 OSBPL8Q9BZF1 889 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 RBM12Q9NTZ6 932 aaKnown RBP23.61■■□□□ 1.37
UFD1-201ENST00000263202 FZD10Q9ULW2 581 aa23.61■■□□□ 1.37
UFD1-201ENST00000263202 CHD9Q3L8U1 2897 aa23.6■■□□□ 1.37
UFD1-201ENST00000263202 TCRBV7S2A1N4TA0A589 114 aa23.6■■□□□ 1.37
UFD1-201ENST00000263202 EFCAB8A8MWE9 144 aa23.6■■□□□ 1.37
UFD1-201ENST00000263202 CD48P09326 243 aa23.6■■□□□ 1.37
UFD1-201ENST00000263202 RARGP13631 454 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms