RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 XPO7Q9UIA9 1087 aaKnown RBP9.9□□□□□ -0.82
SIM1-201ENST00000262901 PJA2O43164 708 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 XPOTO43592 962 aaKnown RBP9.9□□□□□ -0.82
SIM1-201ENST00000262901 GJB6O95452 261 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 GARTP22102 1010 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 GJA9P57773 515 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 CAPSQ13938 189 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 KYAT1Q16773 422 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 KIZQ2M2Z5 673 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 RABGAP1LQ5R372 815 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 TMEM63BQ5T3F8 832 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 C10orf62Q5T681 223 aaPredicted RBP9.9□□□□□ -0.82
SIM1-201ENST00000262901 RCOR2Q8IZ40 523 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 DAW1Q8N136 415 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 FEZF2Q8TBJ5 459 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 KIF12Q96FN5 646 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 TSSK1BQ9BXA7 367 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 ST6GALNAC4Q9H4F1 302 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 ZNF304Q9HCX3 659 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 ANGPTL2Q9UKU9 493 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 TMCC3Q9ULS5 477 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 SNX9Q9Y5X1 595 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 PTCH2Q9Y6C5 1203 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 A8MXQ7 604 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 F2P00734 622 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 CTSHP09668 335 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 ZFXP17010 805 aaPredicted RBP9.9□□□□□ -0.82
SIM1-201ENST00000262901 KRT4P19013 534 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 CCND3P30281 292 aaPredicted RBP9.9□□□□□ -0.82
SIM1-201ENST00000262901 ARL2P36404 184 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 PGM1P36871 562 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 MLH1P40692 756 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 RPL21P46778 160 aaKnown RBP9.9□□□□□ -0.82
SIM1-201ENST00000262901 PTENP60484 403 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 PRPSAP1Q14558 356 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 LBRQ14739 615 aaKnown RBP9.9□□□□□ -0.82
SIM1-201ENST00000262901 KDELC2Q7Z4H8 507 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 SIX5Q8N196 739 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 FAM71DQ8N9W8 422 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 DNAJB3Q8WWF6 145 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 CENPTQ96BT3 561 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 ACAP3Q96P50 834 aa9.9□□□□□ -0.82
SIM1-201ENST00000262901 GNEQ9Y223 722 aaKnown RBP9.9□□□□□ -0.82
SIM1-201ENST00000262901 R3HDM2Q9Y2K5 976 aaKnown RBP9.9□□□□□ -0.82
SIM1-201ENST00000262901 COL11A1P12107 1806 aaPredicted RBP9.9□□□□□ -0.83
SIM1-201ENST00000262901 ASGR1P07306 291 aa9.9□□□□□ -0.83
SIM1-201ENST00000262901 HSPA1AP0DMV8 641 aaKnown RBP9.9□□□□□ -0.83
SIM1-201ENST00000262901 HSPA1BP0DMV9 641 aaKnown RBP9.9□□□□□ -0.83
SIM1-201ENST00000262901 LCP1P13796 627 aa9.9□□□□□ -0.83
SIM1-201ENST00000262901 MX2P20592 715 aa9.9□□□□□ -0.83
SIM1-201ENST00000262901 ATXN3P54252 364 aaPredicted RBP9.9□□□□□ -0.83
SIM1-201ENST00000262901 POU5F1BQ06416 359 aa9.9□□□□□ -0.83
SIM1-201ENST00000262901 THOC5Q13769 683 aaKnown RBP9.9□□□□□ -0.83
SIM1-201ENST00000262901 KCNA10Q16322 511 aa9.9□□□□□ -0.83
SIM1-201ENST00000262901 PID1Q7Z2X4 250 aa9.9□□□□□ -0.83
SIM1-201ENST00000262901 DTNBP1Q96EV8 351 aa9.9□□□□□ -0.83
SIM1-201ENST00000262901 TMEM121Q9BTD3 319 aa9.9□□□□□ -0.83
SIM1-201ENST00000262901 IER2Q9BTL4 223 aa9.9□□□□□ -0.83
SIM1-201ENST00000262901 Q9H521 79 aa9.9□□□□□ -0.83
SIM1-201ENST00000262901 DDX56Q9NY93 547 aaKnown RBP9.9□□□□□ -0.83
SIM1-201ENST00000262901 PSMC3IPQ9P2W1 217 aaPredicted RBP9.9□□□□□ -0.83
SIM1-201ENST00000262901 HAO1Q9UJM8 370 aa9.9□□□□□ -0.83
SIM1-201ENST00000262901 SALL4Q9UJQ4 1053 aa9.9□□□□□ -0.83
SIM1-201ENST00000262901 PFDN1O60925 122 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 MARCKSL1P49006 195 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 TUBP50607 506 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 ARPP19P56211 112 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 DLG4P78352 724 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 TWF2Q6IBS0 349 aaKnown RBP9.89□□□□□ -0.83
SIM1-201ENST00000262901 ZPBP2Q6X784 338 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 C16orf70Q9BSU1 422 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 CFHR5Q9BXR6 569 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 ROPN1BQ9BZX4 212 aaPredicted RBP9.89□□□□□ -0.83
SIM1-201ENST00000262901 SIK2Q9H0K1 926 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 ROPN1Q9HAT0 212 aaPredicted RBP9.89□□□□□ -0.83
SIM1-201ENST00000262901 ZC3H7BQ9UGR2 993 aaKnown RBP9.89□□□□□ -0.83
SIM1-201ENST00000262901 TMA7Q9Y2S6 64 aaKnown RBP9.89□□□□□ -0.83
SIM1-201ENST00000262901 PTPRFP10586 1907 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 SMIM35A0A1B0GVV1 85 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 CSDE1O75534 798 aaKnown RBP9.89□□□□□ -0.83
SIM1-201ENST00000262901 C22orf31O95567 290 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 RARAP10276 462 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 EIF2B5Q13144 721 aaKnown RBP9.89□□□□□ -0.83
SIM1-201ENST00000262901 BLMHQ13867 455 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 TARBP2Q15633 366 aaKnown RBP9.89□□□□□ -0.83
SIM1-201ENST00000262901 RNF135Q8IUD6 432 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 EMC1Q8N766 993 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 MAGEC3Q8TD91 643 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 SH3TC2Q8TF17 1288 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 BSNDQ8WZ55 320 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.89□□□□□ -0.83
SIM1-201ENST00000262901 ANLNQ9NQW6 1124 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 SENP1Q9P0U3 644 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 SMG5Q9UPR3 1016 aaKnown RBP9.89□□□□□ -0.83
SIM1-201ENST00000262901 PIN4Q9Y237 131 aaKnown RBP9.89□□□□□ -0.83
SIM1-201ENST00000262901 GOLGA4Q13439 2230 aaKnown RBP9.89□□□□□ -0.83
SIM1-201ENST00000262901 LOC100653049A0A140TA62 436 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 ACKR2O00590 384 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 EXTL3O43909 919 aa9.89□□□□□ -0.83
SIM1-201ENST00000262901 KRT34O76011 436 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms