RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 CCDC14Q49A88 953 aa25.47■■□□□ 1.67
SCN1B-201ENST00000262631 SH3PXD2AQ5TCZ1 1133 aa25.47■■□□□ 1.67
SCN1B-201ENST00000262631 OTUD1Q5VV17 481 aaPredicted RBP25.47■■□□□ 1.67
SCN1B-201ENST00000262631 POTEHQ6S545 545 aa25.47■■□□□ 1.67
SCN1B-201ENST00000262631 LEMD2Q8NC56 503 aa25.47■■□□□ 1.67
SCN1B-201ENST00000262631 ADAM32Q8TC27 787 aa25.47■■□□□ 1.67
SCN1B-201ENST00000262631 SLC22A12Q96S37 553 aa25.47■■□□□ 1.67
SCN1B-201ENST00000262631 DDX23Q9BUQ8 820 aaKnown RBP25.47■■□□□ 1.67
SCN1B-201ENST00000262631 TSGA10Q9BZW7 698 aa25.47■■□□□ 1.67
SCN1B-201ENST00000262631 COL6A3P12111 3177 aa25.47■■□□□ 1.67
SCN1B-201ENST00000262631 C2orf16Q68DN1 1984 aa25.46■■□□□ 1.67
SCN1B-201ENST00000262631 ZSCAN12O43309 604 aa25.46■■□□□ 1.67
SCN1B-201ENST00000262631 KRT86O43790 486 aa25.46■■□□□ 1.67
SCN1B-201ENST00000262631 OAS1P00973 400 aaKnown RBP25.46■■□□□ 1.67
SCN1B-201ENST00000262631 GPD1P21695 349 aa25.46■■□□□ 1.67
SCN1B-201ENST00000262631 NOS2P35228 1153 aa25.46■■□□□ 1.67
SCN1B-201ENST00000262631 ZNF143P52747 638 aaPredicted RBP25.46■■□□□ 1.67
SCN1B-201ENST00000262631 SKIV2LQ15477 1246 aaKnown RBP25.46■■□□□ 1.67
SCN1B-201ENST00000262631 C15orf59Q2T9L4 293 aaPredicted RBP25.46■■□□□ 1.67
SCN1B-201ENST00000262631 RAB6CQ53S08 254 aa25.46■■□□□ 1.67
SCN1B-201ENST00000262631 HECTD3Q5T447 861 aa25.46■■□□□ 1.67
SCN1B-201ENST00000262631 RSRC2Q7L4I2 434 aaKnown RBP25.46■■□□□ 1.67
SCN1B-201ENST00000262631 SMRP1Q8NCR6 262 aa25.46■■□□□ 1.67
SCN1B-201ENST00000262631 DQX1Q8TE96 717 aaKnown RBP25.46■■□□□ 1.67
SCN1B-201ENST00000262631 ING5Q8WYH8 240 aa25.46■■□□□ 1.67
SCN1B-201ENST00000262631 CYP2S1Q96SQ9 504 aa25.46■■□□□ 1.67
SCN1B-201ENST00000262631 RNF38Q9H0F5 515 aa25.46■■□□□ 1.67
SCN1B-201ENST00000262631 RAB6CQ9H0N0 254 aa25.46■■□□□ 1.67
SCN1B-201ENST00000262631 TRPC7Q9HCX4 862 aa25.46■■□□□ 1.67
SCN1B-201ENST00000262631 BRWD1Q9NSI6 2320 aa25.46■■□□□ 1.67
SCN1B-201ENST00000262631 COCHO43405 550 aa25.45■■□□□ 1.67
SCN1B-201ENST00000262631 FGF19O95750 216 aa25.45■■□□□ 1.67
SCN1B-201ENST00000262631 CEBPBP17676 345 aa25.45■■□□□ 1.67
SCN1B-201ENST00000262631 ATP11AP98196 1134 aa25.45■■□□□ 1.67
SCN1B-201ENST00000262631 ARHGAP29Q52LW3 1261 aa25.45■■□□□ 1.67
SCN1B-201ENST00000262631 C10orf120Q5SQS8 335 aa25.45■■□□□ 1.67
SCN1B-201ENST00000262631 CES5AQ6NT32 575 aa25.45■■□□□ 1.67
SCN1B-201ENST00000262631 CPNE8Q86YQ8 564 aa25.45■■□□□ 1.67
SCN1B-201ENST00000262631 MRPS31Q92665 395 aaKnown RBP25.45■■□□□ 1.67
SCN1B-201ENST00000262631 NT5C3BQ969T7 300 aa25.45■■□□□ 1.67
SCN1B-201ENST00000262631 GCNAQ96QF7 691 aa25.45■■□□□ 1.67
SCN1B-201ENST00000262631 NPY6RQ99463 290 aa25.45■■□□□ 1.67
SCN1B-201ENST00000262631 TRIM62Q9BVG3 475 aa25.45■■□□□ 1.67
SCN1B-201ENST00000262631 UBE2ZQ9H832 354 aaPredicted RBP25.45■■□□□ 1.67
SCN1B-201ENST00000262631 WDR6Q9NNW5 1121 aaKnown RBP25.45■■□□□ 1.67
SCN1B-201ENST00000262631 SFMBT1Q9UHJ3 866 aa25.45■■□□□ 1.67
SCN1B-201ENST00000262631 MRPS23Q9Y3D9 190 aaKnown RBP25.45■■□□□ 1.67
SCN1B-201ENST00000262631 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.45■■□□□ 1.66
SCN1B-201ENST00000262631 MOCS3O95396 460 aa25.45■■□□□ 1.66
SCN1B-201ENST00000262631 RALAP11233 206 aa25.45■■□□□ 1.66
SCN1B-201ENST00000262631 KCNA5P22460 613 aa25.45■■□□□ 1.66
SCN1B-201ENST00000262631 TUBP50607 506 aa25.45■■□□□ 1.66
SCN1B-201ENST00000262631 HADHBP55084 474 aaKnown RBP25.45■■□□□ 1.66
SCN1B-201ENST00000262631 SLC25A52Q3SY17 297 aa25.45■■□□□ 1.66
SCN1B-201ENST00000262631 DAB2IPQ5VWQ8 1189 aa25.45■■□□□ 1.66
SCN1B-201ENST00000262631 MAB21L3Q8N8X9 362 aa25.45■■□□□ 1.66
SCN1B-201ENST00000262631 TPCN2Q8NHX9 752 aa25.45■■□□□ 1.66
SCN1B-201ENST00000262631 FNIP1Q8TF40 1166 aa25.45■■□□□ 1.66
SCN1B-201ENST00000262631 RNF139Q8WU17 664 aa25.45■■□□□ 1.66
SCN1B-201ENST00000262631 TBCBQ99426 244 aa25.45■■□□□ 1.66
SCN1B-201ENST00000262631 IRX2Q9BZI1 471 aaPredicted RBP25.45■■□□□ 1.66
SCN1B-201ENST00000262631 GOLPH3Q9H4A6 298 aa25.45■■□□□ 1.66
SCN1B-201ENST00000262631 MYO1FO00160 1098 aa25.44■■□□□ 1.66
SCN1B-201ENST00000262631 DPYSL4O14531 572 aa25.44■■□□□ 1.66
SCN1B-201ENST00000262631 CCP110O43303 1012 aa25.44■■□□□ 1.66
SCN1B-201ENST00000262631 BUB1BO60566 1050 aaPredicted RBP25.44■■□□□ 1.66
SCN1B-201ENST00000262631 PSMA2P25787 234 aa25.44■■□□□ 1.66
SCN1B-201ENST00000262631 SDC4P31431 198 aa25.44■■□□□ 1.66
SCN1B-201ENST00000262631 NAP1L1P55209 391 aaKnown RBP25.44■■□□□ 1.66
SCN1B-201ENST00000262631 EFEMP1Q12805 493 aa25.44■■□□□ 1.66
SCN1B-201ENST00000262631 CDO1Q16878 200 aa25.44■■□□□ 1.66
SCN1B-201ENST00000262631 ATAT1Q5SQI0 421 aa25.44■■□□□ 1.66
SCN1B-201ENST00000262631 TAC4Q86UU9 113 aa25.44■■□□□ 1.66
SCN1B-201ENST00000262631 ARL14EPQ8N8R7 260 aaPredicted RBP25.44■■□□□ 1.66
SCN1B-201ENST00000262631 SLC46A2Q9BY10 475 aa25.44■■□□□ 1.66
SCN1B-201ENST00000262631 CAPN6Q9Y6Q1 641 aa25.44■■□□□ 1.66
SCN1B-201ENST00000262631 CLUHO75153 1309 aa25.44■■□□□ 1.66
SCN1B-201ENST00000262631 TMEM110-MUSTN1A8MSY1 372 aa25.43■■□□□ 1.66
SCN1B-201ENST00000262631 ZNF197O14709 1029 aa25.43■■□□□ 1.66
SCN1B-201ENST00000262631 MSI1O43347 362 aaKnown RBP25.43■■□□□ 1.66
SCN1B-201ENST00000262631 SULT1E1P49888 294 aa25.43■■□□□ 1.66
SCN1B-201ENST00000262631 ATXN1P54253 815 aaKnown RBP25.43■■□□□ 1.66
SCN1B-201ENST00000262631 MESDQ14696 234 aa25.43■■□□□ 1.66
SCN1B-201ENST00000262631 CBX2Q14781 532 aaPredicted RBP25.43■■□□□ 1.66
SCN1B-201ENST00000262631 GPR158Q5T848 1215 aa25.43■■□□□ 1.66
SCN1B-201ENST00000262631 MSANTD2Q6P1R3 559 aa25.43■■□□□ 1.66
SCN1B-201ENST00000262631 MIB1Q86YT6 1006 aa25.43■■□□□ 1.66
SCN1B-201ENST00000262631 ZNF276Q8N554 614 aa25.43■■□□□ 1.66
SCN1B-201ENST00000262631 ARFGAP1Q8N6T3 406 aa25.43■■□□□ 1.66
SCN1B-201ENST00000262631 CNPY3Q9BT09 278 aa25.43■■□□□ 1.66
SCN1B-201ENST00000262631 SMOC2Q9H3U7 446 aa25.43■■□□□ 1.66
SCN1B-201ENST00000262631 CD207Q9UJ71 328 aa25.43■■□□□ 1.66
SCN1B-201ENST00000262631 OBSL1O75147 1896 aa25.43■■□□□ 1.66
SCN1B-201ENST00000262631 M0QYT0 321 aa25.42■■□□□ 1.66
SCN1B-201ENST00000262631 IGLV3-25P01717 112 aa25.42■■□□□ 1.66
SCN1B-201ENST00000262631 FSHRP23945 695 aa25.42■■□□□ 1.66
SCN1B-201ENST00000262631 PTPN9P43378 593 aa25.42■■□□□ 1.66
SCN1B-201ENST00000262631 BNIPLQ7Z465 357 aa25.42■■□□□ 1.66
SCN1B-201ENST00000262631 ZSWIM3Q96MP5 696 aa25.42■■□□□ 1.66
SCN1B-201ENST00000262631 KCND1Q9NSA2 647 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms