RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 STK38LQ9Y2H1 464 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 hCG_1818297A0A087WSY0 165 aa8.52□□□□□ -1.04
PTPN3-201ENST00000262539 TISP43B9A030 160 aa8.52□□□□□ -1.04
PTPN3-201ENST00000262539 CYB561D2O14569 222 aa8.52□□□□□ -1.04
PTPN3-201ENST00000262539 MT-ND3P03897 115 aa8.52□□□□□ -1.04
PTPN3-201ENST00000262539 RARAP10276 462 aa8.52□□□□□ -1.04
PTPN3-201ENST00000262539 NPR3P17342 541 aa8.52□□□□□ -1.04
PTPN3-201ENST00000262539 GGCXP38435 758 aa8.52□□□□□ -1.04
PTPN3-201ENST00000262539 ST8SIA6P61647 398 aa8.52□□□□□ -1.04
PTPN3-201ENST00000262539 ZNF211Q13398 564 aaPredicted RBP8.52□□□□□ -1.04
PTPN3-201ENST00000262539 TRIM67Q6ZTA4 783 aa8.52□□□□□ -1.04
PTPN3-201ENST00000262539 METTL3Q86U44 580 aaKnown RBP8.52□□□□□ -1.04
PTPN3-201ENST00000262539 EFHBQ8N7U6 833 aa8.52□□□□□ -1.04
PTPN3-201ENST00000262539 CASKIN2Q8WXE0 1202 aa8.52□□□□□ -1.04
PTPN3-201ENST00000262539 STARD7Q9NQZ5 370 aa8.52□□□□□ -1.04
PTPN3-201ENST00000262539 VPS45Q9NRW7 570 aa8.52□□□□□ -1.04
PTPN3-201ENST00000262539 TMEM161AQ9NX61 479 aa8.52□□□□□ -1.04
PTPN3-201ENST00000262539 GTF2IRD1Q9UHL9 959 aa8.52□□□□□ -1.04
PTPN3-201ENST00000262539 SNX2O60749 519 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 VNN1O95497 513 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 CYBBP04839 570 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 IFNA8P32881 189 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 PPM1AP35813 382 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 PALB2Q86YC2 1186 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 SLC35B2Q8TB61 432 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 DUSP16Q9BY84 665 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 A0A0U1RQF3 1178 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 POC1B-GALNT4F8VUJ3 575 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 CHADO15335 359 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 FKTNO75072 461 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 APOA4P06727 396 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 IRF1P10914 325 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 CES1P23141 567 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 CACNB2Q08289 660 aaPredicted RBP8.52□□□□□ -1.05
PTPN3-201ENST00000262539 TAF11Q15544 211 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 RRAGCQ9HB90 399 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 PDGFCQ9NRA1 345 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 ALOX15BO15296 676 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 FAM107AO95990 144 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 KDELR1P24390 212 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 MDH1P40925 334 aaKnown RBP8.52□□□□□ -1.05
PTPN3-201ENST00000262539 FLT3LGP49771 235 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 SCNN1GP51170 649 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 ARHGDIAP52565 204 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 NAA30Q147X3 362 aaPredicted RBP8.52□□□□□ -1.05
PTPN3-201ENST00000262539 ATG16L1Q676U5 607 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 CYS1Q717R9 158 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 LRRC6Q86X45 466 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 UHMK1Q8TAS1 419 aaKnown RBP8.52□□□□□ -1.05
PTPN3-201ENST00000262539 APOBEC3GQ9HC16 384 aaKnown RBP8.52□□□□□ -1.05
PTPN3-201ENST00000262539 KRT82Q9NSB4 513 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 NEU2Q9Y3R4 380 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 COL11A2P13942 1736 aaPredicted RBP8.52□□□□□ -1.05
PTPN3-201ENST00000262539 TMEM189-UBE2V1I3L0A0 370 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 ABLIM1O14639 778 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 TMCC1O94876 653 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 SERPIND1P05546 499 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 HSD17B3P37058 310 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 ARSEP51690 589 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 GTF2H3Q13889 308 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 BBS9Q3SYG4 887 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 PTPN20Q4JDL3 420 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 XKR4Q5GH76 650 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 THEMIS2Q5TEJ8 643 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 C9orf57Q5W0N0 161 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 ANKS1BQ7Z6G8 1248 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 SPATA2LQ8IUW3 424 aaPredicted RBP8.52□□□□□ -1.05
PTPN3-201ENST00000262539 SCG3Q8WXD2 468 aaKnown RBP8.52□□□□□ -1.05
PTPN3-201ENST00000262539 CD101Q93033 1021 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 SENP8Q96LD8 212 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 POP1Q99575 1024 aaKnown RBP8.52□□□□□ -1.05
PTPN3-201ENST00000262539 TRIM45Q9H8W5 580 aaPredicted RBP8.52□□□□□ -1.05
PTPN3-201ENST00000262539 TMBIM4Q9HC24 238 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 USP18Q9UMW8 372 aa8.52□□□□□ -1.05
PTPN3-201ENST00000262539 PAMP19021 973 aa8.51□□□□□ -1.05
PTPN3-201ENST00000262539 MAGEA4P43358 317 aa8.51□□□□□ -1.05
PTPN3-201ENST00000262539 HDAC4P56524 1084 aa8.51□□□□□ -1.05
PTPN3-201ENST00000262539 OVOS1Q6IE37 1185 aa8.51□□□□□ -1.05
PTPN3-201ENST00000262539 KLC3Q6P597 504 aa8.51□□□□□ -1.05
PTPN3-201ENST00000262539 SIKE1Q9BRV8 207 aa8.51□□□□□ -1.05
PTPN3-201ENST00000262539 FSD1LQ9BXM9 530 aa8.51□□□□□ -1.05
PTPN3-201ENST00000262539 GREB1LQ9C091 1923 aaPredicted RBP8.51□□□□□ -1.05
PTPN3-201ENST00000262539 YBX3P16989 372 aaKnown RBP eCLIP8.51□□□□□ -1.05
PTPN3-201ENST00000262539 MAGEA11P43364 429 aa8.51□□□□□ -1.05
PTPN3-201ENST00000262539 BASP1P80723 227 aaKnown RBP8.51□□□□□ -1.05
PTPN3-201ENST00000262539 YTHDF3Q7Z739 585 aaKnown RBP8.51□□□□□ -1.05
PTPN3-201ENST00000262539 SAPCD2Q86UD0 394 aa8.51□□□□□ -1.05
PTPN3-201ENST00000262539 SCAF8Q9UPN6 1271 aaKnown RBP8.51□□□□□ -1.05
PTPN3-201ENST00000262539 CHEK2O96017 543 aa8.51□□□□□ -1.05
PTPN3-201ENST00000262539 ZNF865P0CJ78 1059 aaPredicted RBP8.51□□□□□ -1.05
PTPN3-201ENST00000262539 PYGMP11217 842 aa8.51□□□□□ -1.05
PTPN3-201ENST00000262539 PTPN1P18031 435 aaKnown RBP8.51□□□□□ -1.05
PTPN3-201ENST00000262539 PRKAA2P54646 552 aa8.51□□□□□ -1.05
PTPN3-201ENST00000262539 TSNAXIP1Q2TAA8 658 aa8.51□□□□□ -1.05
PTPN3-201ENST00000262539 ATP6V0D2Q8N8Y2 350 aa8.51□□□□□ -1.05
PTPN3-201ENST00000262539 TRAPPC12Q8WVT3 735 aa8.51□□□□□ -1.05
PTPN3-201ENST00000262539 DNAJB3Q8WWF6 145 aa8.51□□□□□ -1.05
PTPN3-201ENST00000262539 DHX35Q9H5Z1 703 aaKnown RBP8.51□□□□□ -1.05
PTPN3-201ENST00000262539 EIF2B3Q9NR50 452 aaKnown RBP8.51□□□□□ -1.05
PTPN3-201ENST00000262539 NOVA2Q9UNW9 492 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms