RNA–Protein interactions for RNA: ENST00000262043.7

PHF3-201, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHF3, Length 8,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-201ENST00000262043 PHKG1Q16816 387 aa10.54□□□□□ -0.72
PHF3-201ENST00000262043 PAPD7Q5XG87 772 aaKnown RBP10.54□□□□□ -0.72
PHF3-201ENST00000262043 GPR141Q7Z602 305 aa10.54□□□□□ -0.72
PHF3-201ENST00000262043 CCNJLQ8IV13 435 aa10.54□□□□□ -0.72
PHF3-201ENST00000262043 HERC6Q8IVU3 1022 aa10.54□□□□□ -0.72
PHF3-201ENST00000262043 TATDN2Q93075 761 aa10.54□□□□□ -0.72
PHF3-201ENST00000262043 PADI4Q9UM07 663 aa10.54□□□□□ -0.72
PHF3-201ENST00000262043 LTN1O94822 1766 aa10.54□□□□□ -0.72
PHF3-201ENST00000262043 A0A087WZ62 844 aa10.54□□□□□ -0.72
PHF3-201ENST00000262043 MGAT4DA6NG13 374 aa10.54□□□□□ -0.72
PHF3-201ENST00000262043 CPSF4O95639 269 aaKnown RBP10.54□□□□□ -0.72
PHF3-201ENST00000262043 TCF3P15923 654 aa10.54□□□□□ -0.72
PHF3-201ENST00000262043 RRM2P31350 389 aa10.54□□□□□ -0.72
PHF3-201ENST00000262043 OXCT1P55809 520 aa10.54□□□□□ -0.72
PHF3-201ENST00000262043 MMRN1Q13201 1228 aa10.54□□□□□ -0.72
PHF3-201ENST00000262043 NFYCQ13952 458 aa10.54□□□□□ -0.72
PHF3-201ENST00000262043 PLEKHH3Q7Z736 793 aa10.54□□□□□ -0.72
PHF3-201ENST00000262043 SERAC1Q96JX3 654 aa10.54□□□□□ -0.72
PHF3-201ENST00000262043 FDXACB1Q9BRP7 624 aaPredicted RBP10.54□□□□□ -0.72
PHF3-201ENST00000262043 FUT8Q9BYC5 575 aa10.54□□□□□ -0.72
PHF3-201ENST00000262043 KLHL4Q9C0H6 718 aa10.54□□□□□ -0.72
PHF3-201ENST00000262043 FAM153AQ9UHL3 310 aa10.54□□□□□ -0.72
PHF3-201ENST00000262043 VPS28Q9UK41 221 aa10.54□□□□□ -0.72
PHF3-201ENST00000262043 F9P00740 461 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 ATP6V1B2P21281 511 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 SLC1A6P48664 564 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 TKTL1P51854 596 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 CSHL1Q14406 222 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 ARHGAP17Q68EM7 881 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 CHMP1BQ7LBR1 199 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 TRIM69Q86WT6 500 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 B3GALNT2Q8NCR0 500 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 OPTNQ96CV9 577 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 PHF21BQ96EK2 531 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 CEP41Q9BYV8 373 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 SNX8Q9Y5X2 465 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 ZNF682O95780 498 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 STAU1O95793 577 aaKnown RBP10.53□□□□□ -0.72
PHF3-201ENST00000262043 PEX5P50542 639 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 PGM5Q15124 567 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 EZH2Q15910 746 aaKnown RBP10.53□□□□□ -0.72
PHF3-201ENST00000262043 BNC2Q6ZN30 1099 aaPredicted RBP10.53□□□□□ -0.72
PHF3-201ENST00000262043 SEMA4DQ92854 862 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 CXorf56Q9H5V9 222 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 ITGA11Q9UKX5 1188 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 SOX13Q9UN79 622 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 DRG1Q9Y295 367 aaKnown RBP10.53□□□□□ -0.72
PHF3-201ENST00000262043 ERI2A8K979 691 aaKnown RBP10.53□□□□□ -0.72
PHF3-201ENST00000262043 CBX4O00257 560 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 JCHAINP01591 159 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 GSTM1P09488 218 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 ZCCHC18P0CG32 403 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 CHRNB3Q05901 458 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 ZCWPW2Q504Y3 356 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 CCDC92Q53HC0 331 aaPredicted RBP10.53□□□□□ -0.72
PHF3-201ENST00000262043 EDEM1Q92611 657 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 DTNBP1Q96EV8 351 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 NAT9Q9BTE0 207 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 GPAMQ9HCL2 828 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 PIH1D1Q9NWS0 290 aaKnown RBP10.53□□□□□ -0.72
PHF3-201ENST00000262043 COPG1Q9Y678 874 aaKnown RBP10.53□□□□□ -0.72
PHF3-201ENST00000262043 EGFRP00533 1210 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 BST2Q10589 180 aaKnown RBP10.53□□□□□ -0.72
PHF3-201ENST00000262043 MPP3Q13368 585 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 RINLQ6ZS11 566 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 FBXO25Q8TCJ0 367 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 PPP1R10Q96QC0 940 aaKnown RBP10.53□□□□□ -0.72
PHF3-201ENST00000262043 TLR8Q9NR97 1041 aaKnown RBP10.53□□□□□ -0.72
PHF3-201ENST00000262043 SLC12A8A0AV02 714 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 TOMM70O94826 608 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 DARSP14868 501 aaKnown RBP10.53□□□□□ -0.72
PHF3-201ENST00000262043 AKAP5P24588 427 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 ZNF614Q8N883 585 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 COPS7BQ9H9Q2 264 aaPredicted RBP10.53□□□□□ -0.72
PHF3-201ENST00000262043 DDX43Q9NXZ2 648 aaKnown RBP10.53□□□□□ -0.72
PHF3-201ENST00000262043 ARHGAP20Q9P2F6 1191 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 TMX2Q9Y320 296 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 SMNDC1O75940 238 aaKnown RBP eCLIP10.53□□□□□ -0.72
PHF3-201ENST00000262043 RHOCP08134 193 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 VIL1P09327 827 aaKnown RBP10.53□□□□□ -0.72
PHF3-201ENST00000262043 FGD2Q7Z6J4 655 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 MRPS31Q92665 395 aaKnown RBP10.53□□□□□ -0.72
PHF3-201ENST00000262043 NDEL1Q9GZM8 345 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 DLGAP3O95886 979 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 POMCP01189 267 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 GLI1P08151 1106 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 CKBP12277 381 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 ACADSP16219 412 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 VCLP18206 1134 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 PTPN11Q06124 597 aaPredicted RBP10.53□□□□□ -0.72
PHF3-201ENST00000262043 ATP6AP1LQ52LC2 224 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 TFAP2DQ7Z6R9 452 aa10.53□□□□□ -0.72
PHF3-201ENST00000262043 MAGEA13PA6NCF6 341 aa10.52□□□□□ -0.72
PHF3-201ENST00000262043 DNAJB2P25686 324 aa10.52□□□□□ -0.72
PHF3-201ENST00000262043 CCNG2Q16589 344 aa10.52□□□□□ -0.72
PHF3-201ENST00000262043 CASP10Q92851 521 aa10.52□□□□□ -0.72
PHF3-201ENST00000262043 MTERF3Q96E29 417 aa10.52□□□□□ -0.72
PHF3-201ENST00000262043 KCTD14Q9BQ13 255 aaPredicted RBP10.52□□□□□ -0.72
PHF3-201ENST00000262043 EMILIN2Q9BXX0 1053 aa10.52□□□□□ -0.72
PHF3-201ENST00000262043 RXFP1Q9HBX9 757 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms