RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 TM9SF2Q99805 663 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 GTPBP2Q9BX10 602 aaKnown RBP6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 TBC1D10AQ9BXI6 508 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 VPS51Q9UID3 782 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 CLEC4AQ9UMR7 237 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 MYOM1P52179 1685 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 KRT87PA6NCN2 255 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 NPIPA7E9PJI5 369 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 PRMT3O60678 531 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 USP1O94782 785 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 NPIPA8P0DM63 369 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 SOX6P35712 828 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 RAB4BP61018 213 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 CYGBQ8WWM9 190 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 HTRA1Q92743 480 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 MXD3Q9BW11 206 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 LRRC2Q9BYS8 371 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 ISCUQ9H1K1 167 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 VPS33BQ9H267 617 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 ARMCX3Q9UH62 379 aaPredicted RBP6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 VAV3Q9UKW4 847 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 CDC40O60508 579 aaKnown RBP eCLIP6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 RNF4P78317 190 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 CENPCQ03188 943 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 TRIM71Q2Q1W2 868 aaKnown RBP6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 IL23RQ5VWK5 629 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 FAM45BPQ6NSW5 357 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 TRAPPC11Q7Z392 1133 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 TMPRSS6Q8IU80 811 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 PSMA8Q8TAA3 256 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 JPH3Q8WXH2 748 aaPredicted RBP6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 PIGKQ92643 395 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 EAF2Q96CJ1 260 aaPredicted RBP6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 ARHGEF26Q96DR7 871 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 ZNF486Q96H40 463 aaPredicted RBP6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 CD274Q9NZQ7 290 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 ADGRB2O60241 1585 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 PALLDQ8WX93 1383 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 GNGT2O14610 69 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 TBX3O15119 743 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 GPAA1O43292 621 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 PHF2O75151 1096 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 FKBP9O95302 570 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 ZAP70P43403 619 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 MRPS5P82675 430 aaKnown RBP6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 COASYQ13057 564 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 CHAF1BQ13112 559 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 HERC3Q15034 1050 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 GALNT18Q6P9A2 607 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 TMC4Q7Z404 712 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 KIF18BQ86Y91 864 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 DCP2Q8IU60 420 aaKnown RBP6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 SNX31Q8N9S9 440 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 PIK3C3Q8NEB9 887 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 CEP95Q96GE4 821 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 METTL2AQ96IZ6 378 aaKnown RBP6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 PPP1R2P1Q96PQ5 205 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 FUCA2Q9BTY2 467 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 EFCAB1Q9HAE3 211 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 NPHS2Q9NP85 383 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 MCM9Q9NXL9 1143 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 TAS2R1Q9NYW7 299 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 PCDHB13Q9Y5F0 798 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 ULK1O75385 1050 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 RASGRP1O95267 797 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 POU1F1P28069 291 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 UBA7P41226 1012 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 OCLNQ16625 522 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 PLEKHG6Q3KR16 790 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 SPANXN2Q5MJ10 180 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 RNF43Q68DV7 783 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 ZNF852Q6ZMS4 543 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 FAM13CQ8NE31 585 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 TRPV3Q8NET8 790 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 TTC8Q8TAM2 541 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 HERVK_113Q902F9 699 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 QTRT2Q9H974 415 aaKnown RBP6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 SAMSN1Q9NSI8 373 aaKnown RBP6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 WWOXQ9NZC7 414 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 AMACRQ9UHK6 382 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 SIGLEC1Q9BZZ2 1709 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 NCK2O43639 380 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 CYP19A1P11511 503 aaPredicted RBP6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 MAGEA2P43356 314 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 HAAOP46952 286 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 NDUFA8P51970 172 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 HTRA4P83105 476 aaPredicted RBP6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 RRAGAQ7L523 313 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 DHDDSQ86SQ9 333 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 NELFCDQ8IXH7 590 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 ELMOD1Q8N336 334 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 USP38Q8NB14 1042 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 SLAIN1Q8ND83 568 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 FIG4Q92562 907 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 SAMD11Q96NU1 681 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 TMEM237Q96Q45 408 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 PPA2Q9H2U2 334 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 ARMT1Q9H993 441 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 RIC8AQ9NPQ8 531 aa6.94□□□□□ -1.3
PDGFRA-201ENST00000257290 PRMT8Q9NR22 394 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms