RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 CTAGE3PQ8IX95 158 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 TSEN2Q8NCE0 465 aaKnown RBP12.12□□□□□ -0.47
LIN28A-201ENST00000254231 LCHNA4D1U4 455 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 GALTP07902 379 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 MYL4P12829 197 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 RAB27AP51159 221 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 GDF10P55107 478 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 BYSLQ13895 437 aaKnown RBP12.12□□□□□ -0.47
LIN28A-201ENST00000254231 PIGHQ14442 188 aaPredicted RBP12.12□□□□□ -0.47
LIN28A-201ENST00000254231 GPNMBQ14956 572 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 KRT71Q3SY84 523 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 CES3Q6UWW8 571 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 NAT14Q8WUY8 206 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 BCL7CQ8WUZ0 217 aaPredicted RBP12.12□□□□□ -0.47
LIN28A-201ENST00000254231 SLC35F5Q8WV83 523 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 PABPC5Q96DU9 382 aaKnown RBP12.12□□□□□ -0.47
LIN28A-201ENST00000254231 THOC1Q96FV9 657 aaKnown RBP12.12□□□□□ -0.47
LIN28A-201ENST00000254231 EXOC2Q96KP1 924 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 CARD9Q9H257 536 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 SUDS3Q9H7L9 328 aaPredicted RBP12.12□□□□□ -0.47
LIN28A-201ENST00000254231 PIGVQ9NUD9 493 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 GMIPQ9P107 970 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 ANAPC5Q9UJX4 755 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 SLC12A8A0AV02 714 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 FAM72CH0Y354 149 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 TJP3O95049 919 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 ZNF132P52740 706 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 CCDC85BQ15834 202 aaPredicted RBP12.12□□□□□ -0.47
LIN28A-201ENST00000254231 FAM72AQ5TYM5 149 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 FAM72DQ6L9T8 149 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 KCNT2Q6UVM3 1135 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 CCNI2Q6ZMN8 369 aaPredicted RBP12.12□□□□□ -0.47
LIN28A-201ENST00000254231 FAM72BQ86X60 149 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 REM2Q8IYK8 340 aaPredicted RBP12.12□□□□□ -0.47
LIN28A-201ENST00000254231 MYCBPAPQ8TBZ2 947 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 CNPY3Q9BT09 278 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 CRISPLD1Q9H336 500 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 TMEM161AQ9NX61 479 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 GOLGA8KD6RF30 607 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 GOLGA8TH3BQL2 631 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 MCF2LO15068 1137 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 HSF2BPO75031 334 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 TRUB2O95900 331 aaKnown RBP12.11□□□□□ -0.47
LIN28A-201ENST00000254231 LTFP02788 710 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 MYBL1P10243 752 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 HSPA8P11142 646 aaKnown RBP12.11□□□□□ -0.47
LIN28A-201ENST00000254231 COILP38432 576 aaPredicted RBP12.11□□□□□ -0.47
LIN28A-201ENST00000254231 ABCG1P45844 678 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 RPL21P46778 160 aaKnown RBP12.11□□□□□ -0.47
LIN28A-201ENST00000254231 PEX5P50542 639 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 SESN2P58004 480 aaPredicted RBP12.11□□□□□ -0.47
LIN28A-201ENST00000254231 PSMD5Q16401 504 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 PCSK7Q16549 785 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 MAP9Q49MG5 647 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 OTUD6BQ8N6M0 293 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 SMARCD1Q96GM5 515 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 DDX27Q96GQ7 796 aaKnown RBP12.11□□□□□ -0.47
LIN28A-201ENST00000254231 UNKQ9C0B0 810 aaKnown RBP12.11□□□□□ -0.47
LIN28A-201ENST00000254231 RAB6BQ9NRW1 208 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 RGS18Q9NS28 235 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 BUD23O43709 281 aaKnown RBP12.11□□□□□ -0.47
LIN28A-201ENST00000254231 RFPL2O75678 378 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 CTNNB1P35222 781 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 IRX4P78413 519 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 PTP4A2Q12974 167 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 TRIM71Q2Q1W2 868 aaKnown RBP12.11□□□□□ -0.47
LIN28A-201ENST00000254231 HDXQ7Z353 690 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 ZMIZ2Q8NF64 920 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 FMO2Q99518 471 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 KLF6Q99612 283 aaPredicted RBP12.11□□□□□ -0.47
LIN28A-201ENST00000254231 SELENOSQ9BQE4 189 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 CCSER2Q9H7U1 834 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 DMAP1Q9NPF5 467 aaPredicted RBP12.11□□□□□ -0.47
LIN28A-201ENST00000254231 PAK6Q9NQU5 681 aaPredicted RBP12.11□□□□□ -0.47
LIN28A-201ENST00000254231 FAM8A1Q9UBU6 413 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 PRDM4Q9UKN5 801 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 INTUQ9ULD6 942 aa12.11□□□□□ -0.47
LIN28A-201ENST00000254231 AMHP03971 560 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 ZNF280DQ6N043 979 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 MAP7D3Q8IWC1 876 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 UNC45BQ8IWX7 931 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 TTPALQ9BTX7 342 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 DDX23Q9BUQ8 820 aaKnown RBP12.1□□□□□ -0.47
LIN28A-201ENST00000254231 PHF24Q9UPV7 400 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 GOLGA6L10A6NI86 522 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 AXIN1O15169 862 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 LSM8O95777 96 aaKnown RBP12.1□□□□□ -0.47
LIN28A-201ENST00000254231 CKMP06732 381 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 KDELR1P24390 212 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 KLRC2P26717 231 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 RBL1P28749 1068 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 ITGA8P53708 1063 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 HDAC4P56524 1084 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 MRPS5P82675 430 aaKnown RBP12.1□□□□□ -0.47
LIN28A-201ENST00000254231 GPS2Q13227 327 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 INTS6LQ5JSJ4 861 aaKnown RBP12.1□□□□□ -0.47
LIN28A-201ENST00000254231 TMC5Q6UXY8 1006 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 MICALCLQ6ZW33 695 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 PID1Q7Z2X4 250 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 NPAS4Q8IUM7 802 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms