RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 FZD10Q9ULW2 581 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 FAM92AA1XBS5 289 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 MTMR11A4FU01 709 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 NT5C1B-RDH14C9J2C7 533 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 M0QYT0 321 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 DAPK3O43293 454 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 RTN3O95197 1032 aaPredicted RBP14.77□□□□□ -0.04
SDF2-201ENST00000247020 SOD2P04179 222 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 CD48P09326 243 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 CPB1P15086 417 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 TFE3P19532 575 aaPredicted RBP14.77□□□□□ -0.04
SDF2-201ENST00000247020 ECHS1P30084 290 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 L1CAMP32004 1257 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 KCNJ1P48048 391 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 KRT17Q04695 432 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 ADCY2Q08462 1091 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 HLTFQ14527 1009 aaKnown RBP eCLIP14.77□□□□□ -0.04
SDF2-201ENST00000247020 CASP8Q14790 479 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 LLGL1Q15334 1064 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 OASLQ15646 514 aaKnown RBP14.77□□□□□ -0.04
SDF2-201ENST00000247020 RAB6CQ53S08 254 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 SYPL2Q5VXT5 272 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 BSPRYQ5W0U4 402 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 SLC9A4Q6AI14 798 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 SND1Q7KZF4 910 aaKnown RBP eCLIP14.77□□□□□ -0.045e-8■■■■□ 20.1
SDF2-201ENST00000247020 TMEM173Q86WV6 379 aaPredicted RBP14.77□□□□□ -0.04
SDF2-201ENST00000247020 SLC39A11Q8N1S5 342 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 CCDC89Q8N998 374 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 BBOF1Q8ND07 529 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.77□□□□□ -0.04
SDF2-201ENST00000247020 BCL7CQ8WUZ0 217 aaPredicted RBP14.77□□□□□ -0.04
SDF2-201ENST00000247020 ATG4AQ8WYN0 398 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 NDRG1Q92597 394 aaKnown RBP14.77□□□□□ -0.04
SDF2-201ENST00000247020 HERC2P3Q9BVR0 1158 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 RAB6CQ9H0N0 254 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 WHRNQ9P202 907 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 PRKAG2Q9UGJ0 569 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 NAALADL1Q9UQQ1 740 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 SCML2Q9UQR0 700 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 NEU2Q9Y3R4 380 aa14.77□□□□□ -0.04
SDF2-201ENST00000247020 IL4RP24394 825 aa14.77□□□□□ -0.05
SDF2-201ENST00000247020 PPM1AP35813 382 aa14.77□□□□□ -0.05
SDF2-201ENST00000247020 PSEN1P49768 467 aa14.77□□□□□ -0.05
SDF2-201ENST00000247020 RPL10AP62906 217 aaKnown RBP14.77□□□□□ -0.05
SDF2-201ENST00000247020 DEFB103AP81534 67 aa14.77□□□□□ -0.05
SDF2-201ENST00000247020 CAV1Q03135 178 aa14.77□□□□□ -0.05
SDF2-201ENST00000247020 BTG3Q14201 252 aaPredicted RBP14.77□□□□□ -0.05
SDF2-201ENST00000247020 PSMD5Q16401 504 aa14.77□□□□□ -0.05
SDF2-201ENST00000247020 ARL13BQ3SXY8 428 aa14.77□□□□□ -0.05
SDF2-201ENST00000247020 ANKRD20A8PQ5CZ79 823 aa14.77□□□□□ -0.05
SDF2-201ENST00000247020 ZNF365Q70YC5 407 aa14.77□□□□□ -0.05
SDF2-201ENST00000247020 SCN4BQ8IWT1 228 aa14.77□□□□□ -0.05
SDF2-201ENST00000247020 FBXO22Q8NEZ5 403 aa14.77□□□□□ -0.05
SDF2-201ENST00000247020 TMEM169Q96HH4 297 aa14.77□□□□□ -0.05
SDF2-201ENST00000247020 CCDC114Q96M63 670 aa14.77□□□□□ -0.05
SDF2-201ENST00000247020 WDR6Q9NNW5 1121 aaKnown RBP14.77□□□□□ -0.05
SDF2-201ENST00000247020 DNPEPQ9ULA0 475 aa14.77□□□□□ -0.05
SDF2-201ENST00000247020 APOL1O14791 398 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 MCF2LO15068 1137 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 IGLV3-25P01717 112 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 HAPLN1P10915 354 aaPredicted RBP14.76□□□□□ -0.05
SDF2-201ENST00000247020 ARL4AP40617 200 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 TNNT3P45378 269 aaPredicted RBP14.76□□□□□ -0.05
SDF2-201ENST00000247020 YWHAGP61981 247 aaKnown RBP eCLIP14.76□□□□□ -0.05
SDF2-201ENST00000247020 OTUD4Q01804 1114 aaKnown RBP14.76□□□□□ -0.05
SDF2-201ENST00000247020 DSG1Q02413 1049 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 SNX1Q13596 522 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 NOMO1Q15155 1222 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 ZC3H12AQ5D1E8 599 aaKnown RBP14.76□□□□□ -0.05
SDF2-201ENST00000247020 EFHC2Q5JST6 749 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 SPDYCQ5MJ68 293 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 SPOUT1Q5T280 376 aaKnown RBP14.76□□□□□ -0.05
SDF2-201ENST00000247020 BTBD8Q5XKL5 378 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 MON1AQ86VX9 555 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 FAM131BQ86XD5 332 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 GSPT2Q8IYD1 628 aaKnown RBP14.76□□□□□ -0.05
SDF2-201ENST00000247020 ALLCQ8N6M5 410 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 CCDC185Q8N715 623 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 COLGALT1Q8NBJ5 622 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 SLC7A14Q8TBB6 771 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 ACTL9Q8TC94 416 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 LRRC45Q96CN5 670 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 MCOLN1Q9GZU1 580 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 DPH5Q9H2P9 285 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 PLEKHA4Q9H4M7 779 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 DHX35Q9H5Z1 703 aaKnown RBP14.76□□□□□ -0.05
SDF2-201ENST00000247020 AAASQ9NRG9 546 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 MTMR10Q9NXD2 777 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 FAM53CQ9NYF3 392 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 ZNF148Q9UQR1 794 aa14.76□□□□□ -0.05
SDF2-201ENST00000247020 ZNF189O75820 626 aaPredicted RBP14.75□□□□□ -0.05
SDF2-201ENST00000247020 SASH3O75995 380 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 ITIH2P19823 946 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 PBX3P40426 434 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 RPL21P46778 160 aaKnown RBP14.75□□□□□ -0.05
SDF2-201ENST00000247020 NR2C2P49116 596 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 CXCR3P49682 368 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 RABGGTBP53611 331 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 ATXN1P54253 815 aaKnown RBP14.75□□□□□ -0.05
SDF2-201ENST00000247020 CALCOCO2Q13137 446 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms