RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 ERMARDQ5T6L9 678 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 RRM2BQ7LG56 351 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 MICU2Q8IYU8 434 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 EIF1ADQ8N9N8 165 aaKnown RBP20.43■□□□□ 0.86
SOX4-201ENST00000244745 GLMNQ92990 594 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 BCAT1P54687 386 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 ADARP55265 1226 aaKnown RBP20.43■□□□□ 0.86
SOX4-201ENST00000244745 MAP3K7CLP57077 242 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 CRELD2Q6UXH1 353 aaPredicted RBP20.43■□□□□ 0.86
SOX4-201ENST00000244745 ZCCHC23Q6ZST2 131 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 ADGRF2Q8IZF7 708 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 L3MBTL3Q96JM7 780 aaPredicted RBP20.43■□□□□ 0.86
SOX4-201ENST00000244745 ZFRQ96KR1 1074 aaKnown RBP20.43■□□□□ 0.86
SOX4-201ENST00000244745 ZBED2Q9BTP6 218 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 TMEM161AQ9NX61 479 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 BTBD7Q9P203 1132 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 PRKCIP41743 596 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 GCNT1Q02742 428 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 C16orf72Q14CZ0 275 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 CHSY1Q86X52 802 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 FAM32AQ9Y421 112 aaKnown RBP20.43■□□□□ 0.86
SOX4-201ENST00000244745 RNF225M0QZC1 329 aaPredicted RBP20.42■□□□□ 0.86
SOX4-201ENST00000244745 AHCYL1O43865 530 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 ACO1P21399 889 aaKnown RBP20.42■□□□□ 0.86
SOX4-201ENST00000244745 SNAPC2Q13487 334 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 C10orf120Q5SQS8 335 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 CKAP2Q8WWK9 683 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 RBBP8Q99708 897 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 PDCD2LQ9BRP1 358 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 ACP6Q9NPH0 428 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 NCANO14594 1321 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 ATP6V1E1P36543 226 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 POU5F2Q8N7G0 328 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 KAT2BQ92831 832 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 ZNF333Q96JL9 665 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 VANGL2Q9ULK5 521 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 C6orf222P0C671 652 aaPredicted RBP20.42■□□□□ 0.86
SOX4-201ENST00000244745 GSTT1P30711 240 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 EIF2B2P49770 351 aaKnown RBP20.42■□□□□ 0.86
SOX4-201ENST00000244745 CSE1LP55060 971 aaKnown RBP20.42■□□□□ 0.86
SOX4-201ENST00000244745 AUHQ13825 339 aaKnown RBP20.42■□□□□ 0.86
SOX4-201ENST00000244745 TMEM139Q8IV31 216 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 APBB2Q92870 758 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 DAPK2Q9UIK4 370 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 PGK2P07205 417 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 MGAT5Q09328 741 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 CSHL1Q14406 222 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 FBXO16Q8IX29 292 aaPredicted RBP20.42■□□□□ 0.86
SOX4-201ENST00000244745 THUMPD3Q9BV44 507 aaKnown RBP20.42■□□□□ 0.86
SOX4-201ENST00000244745 GPR63Q9BZJ6 419 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 VIRMAQ69YN4 1812 aaKnown RBP20.42■□□□□ 0.86
SOX4-201ENST00000244745 BTNL10A8MVZ5 291 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 MPOP05164 745 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 ALADP13716 330 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 PBX1P40424 430 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 RGS4P49798 205 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 PPIDQ08752 370 aaKnown RBP20.42■□□□□ 0.86
SOX4-201ENST00000244745 ITGA9Q13797 1035 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 HAS1Q92839 578 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 CCDC126Q96EE4 140 aa20.42■□□□□ 0.86
SOX4-201ENST00000244745 CINPQ9BW66 212 aaPredicted RBP20.42■□□□□ 0.86
SOX4-201ENST00000244745 AVENQ9NQS1 362 aaPredicted RBP20.42■□□□□ 0.86
SOX4-201ENST00000244745 FARP1Q9Y4F1 1045 aaPredicted RBP20.42■□□□□ 0.86
SOX4-201ENST00000244745 CSDE1O75534 798 aaKnown RBP20.41■□□□□ 0.86
SOX4-201ENST00000244745 PPP3CAQ08209 521 aa20.41■□□□□ 0.86
SOX4-201ENST00000244745 MPP3Q13368 585 aa20.41■□□□□ 0.86
SOX4-201ENST00000244745 GJC2Q5T442 439 aaPredicted RBP20.41■□□□□ 0.86
SOX4-201ENST00000244745 AGBL3Q8NEM8 1001 aa20.41■□□□□ 0.86
SOX4-201ENST00000244745 SRRM3A6NNA2 597 aaPredicted RBP20.41■□□□□ 0.86
SOX4-201ENST00000244745 DRD4P21917 467 aa20.41■□□□□ 0.86
SOX4-201ENST00000244745 MGAT1P26572 445 aa20.41■□□□□ 0.86
SOX4-201ENST00000244745 EXOSC4Q9NPD3 245 aaKnown RBP20.41■□□□□ 0.86
SOX4-201ENST00000244745 SNX17Q15036 470 aa20.41■□□□□ 0.86
SOX4-201ENST00000244745 PKN3Q6P5Z2 889 aa20.41■□□□□ 0.86
SOX4-201ENST00000244745 PATL1Q86TB9 770 aaKnown RBP20.41■□□□□ 0.86
SOX4-201ENST00000244745 KATNAL2Q8IYT4 538 aa20.41■□□□□ 0.86
SOX4-201ENST00000244745 SAR1AQ9NR31 198 aa20.41■□□□□ 0.86
SOX4-201ENST00000244745 TRMT6Q9UJA5 497 aaKnown RBP20.41■□□□□ 0.86
SOX4-201ENST00000244745 HNRNPRO43390 633 aaKnown RBP20.41■□□□□ 0.86
SOX4-201ENST00000244745 CHKAP35790 457 aa20.41■□□□□ 0.86
SOX4-201ENST00000244745 NFYCQ13952 458 aa20.41■□□□□ 0.86
SOX4-201ENST00000244745 DCP1BQ8IZD4 617 aaKnown RBP20.41■□□□□ 0.86
SOX4-201ENST00000244745 ABI2Q9NYB9 513 aaPredicted RBP20.41■□□□□ 0.86
SOX4-201ENST00000244745 RRN3P2A6NIE6 340 aa20.4■□□□□ 0.86
SOX4-201ENST00000244745 SNX3O60493 162 aa20.4■□□□□ 0.86
SOX4-201ENST00000244745 TNFAIP8O95379 198 aa20.4■□□□□ 0.86
SOX4-201ENST00000244745 ZNF484Q5JVG2 852 aa20.4■□□□□ 0.86
SOX4-201ENST00000244745 TSHZ1Q6ZSZ6 1077 aa20.4■□□□□ 0.86
SOX4-201ENST00000244745 ETNPPLQ8TBG4 499 aa20.4■□□□□ 0.86
SOX4-201ENST00000244745 DNAJC19Q96DA6 116 aa20.4■□□□□ 0.86
SOX4-201ENST00000244745 VCPIP1Q96JH7 1222 aa20.4■□□□□ 0.86
SOX4-201ENST00000244745 ZNF512Q96ME7 567 aaPredicted RBP20.4■□□□□ 0.86
SOX4-201ENST00000244745 THAP1Q9NVV9 213 aa20.4■□□□□ 0.86
SOX4-201ENST00000244745 CYB561D2O14569 222 aa20.4■□□□□ 0.86
SOX4-201ENST00000244745 SERPINE1P05121 402 aa20.4■□□□□ 0.86
SOX4-201ENST00000244745 RUNX1T1Q06455 604 aa20.4■□□□□ 0.86
SOX4-201ENST00000244745 DDR1Q08345 913 aa20.4■□□□□ 0.86
SOX4-201ENST00000244745 NFIL3Q16649 462 aa20.4■□□□□ 0.86
SOX4-201ENST00000244745 NAT9Q9BTE0 207 aa20.4■□□□□ 0.86
SOX4-201ENST00000244745 TCF7L2Q9NQB0 619 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms