RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 TMA16Q96EY4 203 aaKnown RBP9.58□□□□□ -0.88
COL21A1-201ENST00000244728 GLT1D1Q96MS3 346 aa9.58□□□□□ -0.88
COL21A1-201ENST00000244728 MRIQ9BWK5 157 aa9.58□□□□□ -0.88
COL21A1-201ENST00000244728 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.58□□□□□ -0.88
COL21A1-201ENST00000244728 TJP2Q9UDY2 1190 aa9.58□□□□□ -0.88
COL21A1-201ENST00000244728 VAV3Q9UKW4 847 aa9.58□□□□□ -0.88
COL21A1-201ENST00000244728 SOX13Q9UN79 622 aa9.58□□□□□ -0.88
COL21A1-201ENST00000244728 C4AP0C0L4 1744 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 C4BP0C0L5 1744 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 MYH7P12883 1935 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 C2orf71A6NGG8 1288 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 RRN3P2A6NIE6 340 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 XPO1O14980 1071 aaKnown RBP9.57□□□□□ -0.88
COL21A1-201ENST00000244728 CLPTM1O96005 669 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 POMCP01189 267 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 FAM200BP0CF97 657 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 TGFB3P10600 412 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 HOXD10P28358 340 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 YWHAHQ04917 246 aaPredicted RBP9.57□□□□□ -0.88
COL21A1-201ENST00000244728 C1QBPQ07021 282 aaKnown RBP9.57□□□□□ -0.88
COL21A1-201ENST00000244728 ZNF235Q14590 738 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 EFTUD2Q15029 972 aaKnown RBP eCLIP9.57□□□□□ -0.88
COL21A1-201ENST00000244728 TBCCQ15814 346 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 TCHHL1Q5QJ38 904 aaPredicted RBP9.57□□□□□ -0.88
COL21A1-201ENST00000244728 CWF19L1Q69YN2 538 aaKnown RBP9.57□□□□□ -0.88
COL21A1-201ENST00000244728 GPC2Q8N158 579 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 ZNF398Q8TD17 642 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 SEMA4DQ92854 862 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 FAM136AQ96C01 138 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 TRAPPC9Q96Q05 1148 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 TSPYL2Q9H2G4 693 aaPredicted RBP9.57□□□□□ -0.88
COL21A1-201ENST00000244728 UBP1Q9NZI7 540 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 UBQLN1Q9UMX0 589 aaKnown RBP9.57□□□□□ -0.88
COL21A1-201ENST00000244728 C3orf70A6NLC5 250 aaPredicted RBP9.57□□□□□ -0.88
COL21A1-201ENST00000244728 PEX11AO75192 247 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 SNHG28P0DPA3 235 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 ZFXP17010 805 aaPredicted RBP9.57□□□□□ -0.88
COL21A1-201ENST00000244728 GLRA2P23416 452 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 STIP1P31948 543 aaKnown RBP9.57□□□□□ -0.88
COL21A1-201ENST00000244728 SOX11P35716 441 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 TNFSF9P41273 254 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 KYAT1Q16773 422 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 KIF19Q2TAC6 998 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 RFWD3Q6PCD5 774 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 POTEAQ6S8J7 498 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 RIPOR1Q6ZS17 1223 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 DEFB107AQ8IZN7 70 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 TMEM161BQ8NDZ6 487 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 CATSPER1Q8NEC5 780 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 OR5B17Q8NGF7 314 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 EDEM1Q92611 657 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 MPP4Q96JB8 637 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 RRAGCQ9HB90 399 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 TRPC7Q9HCX4 862 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 RPL26L1Q9UNX3 145 aaKnown RBP9.57□□□□□ -0.88
COL21A1-201ENST00000244728 COL1A1P02452 1464 aaPredicted RBP9.57□□□□□ -0.88
COL21A1-201ENST00000244728 CYB561D2O14569 222 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 S100BP04271 92 aaPredicted RBP9.57□□□□□ -0.88
COL21A1-201ENST00000244728 CLK2P49760 499 aaKnown RBP9.57□□□□□ -0.88
COL21A1-201ENST00000244728 MMP14P50281 582 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 NUDT2P50583 147 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 FLOT2Q14254 428 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 STILQ15468 1287 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 NFIL3Q16649 462 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 DCAF4L1Q3SXM0 396 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 BOLA3Q53S33 107 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 ZNF484Q5JVG2 852 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 CATSPERGQ6ZRH7 1159 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 EFHBQ8N7U6 833 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 GDPD5Q8WTR4 605 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 UCMAQ8WVF2 138 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 ZNF669Q96BR6 464 aaPredicted RBP9.57□□□□□ -0.88
COL21A1-201ENST00000244728 DDX18Q9NVP1 670 aaKnown RBP9.57□□□□□ -0.88
COL21A1-201ENST00000244728 AFF4Q9UHB7 1163 aaKnown RBP9.57□□□□□ -0.88
COL21A1-201ENST00000244728 ARHGAP26Q9UNA1 814 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 KCPQ6ZWJ8 1503 aa9.57□□□□□ -0.88
COL21A1-201ENST00000244728 C17orf102A2RUQ5 167 aa9.56□□□□□ -0.88
COL21A1-201ENST00000244728 EME2A4GXA9 379 aaPredicted RBP9.56□□□□□ -0.88
COL21A1-201ENST00000244728 LACTBL1A8MY62 500 aa9.56□□□□□ -0.88
COL21A1-201ENST00000244728 ABLIM1O14639 778 aa9.56□□□□□ -0.88
COL21A1-201ENST00000244728 MCF2P10911 925 aa9.56□□□□□ -0.88
COL21A1-201ENST00000244728 PCSK1P29120 753 aa9.56□□□□□ -0.88
COL21A1-201ENST00000244728 MAMLD1Q13495 774 aa9.56□□□□□ -0.88
COL21A1-201ENST00000244728 GRIK4Q16099 956 aa9.56□□□□□ -0.88
COL21A1-201ENST00000244728 ALYREFQ86V81 257 aaKnown RBP9.56□□□□□ -0.88
COL21A1-201ENST00000244728 MAP4K3Q8IVH8 894 aa9.56□□□□□ -0.88
COL21A1-201ENST00000244728 TTC30BQ8N4P2 665 aa9.56□□□□□ -0.88
COL21A1-201ENST00000244728 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.56□□□□□ -0.88
COL21A1-201ENST00000244728 TMEM176AQ96HP8 235 aa9.56□□□□□ -0.88
COL21A1-201ENST00000244728 FAXDC2Q96IV6 333 aa9.56□□□□□ -0.88
COL21A1-201ENST00000244728 CCT7Q99832 543 aa9.56□□□□□ -0.88
COL21A1-201ENST00000244728 KATNAL1Q9BW62 490 aa9.56□□□□□ -0.88
COL21A1-201ENST00000244728 NDUFA13Q9P0J0 144 aa9.56□□□□□ -0.88
COL21A1-201ENST00000244728 LGALS13Q9UHV8 139 aa9.56□□□□□ -0.88
COL21A1-201ENST00000244728 NUDT5Q9UKK9 219 aa9.56□□□□□ -0.88
COL21A1-201ENST00000244728 SCN11AQ9UI33 1791 aa9.56□□□□□ -0.88
COL21A1-201ENST00000244728 RNF103-CHMP3A0A140T963 221 aa9.56□□□□□ -0.88
COL21A1-201ENST00000244728 GAS2O43903 313 aaKnown RBP9.56□□□□□ -0.88
COL21A1-201ENST00000244728 SUPT3HO75486 399 aa9.56□□□□□ -0.88
COL21A1-201ENST00000244728 ENDOD1O94919 500 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms